Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.109300.1 |
Family | GH35 |
Protein Properties | Length: 790 Molecular Weight: 88235 Isoelectric Point: 7.7365 |
Chromosome | Chromosome/Scaffold: 00934 Start: 223945 End: 229800 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 1 | 281 | 0 |
MWESLIEKAKMGGLDVVDTYVFWNLHEPSPGIYDFEGRNDLVKFIKLVEKAGLYVHLRIGPYICGEWNFGGFPAWLKFVPGISFRTDNEPFKLAMAKFTK KIVQMMKDERLFQSQGGPIILSQIENEYETEDKVFGEAGFAYMNWAAKMAVQMDTGVPWVMCKQDDAPDPMINTCNGFYCDYFSPNKPYKPNFWTEAWTA WFNNFGGPNHKRPVEDLAFGVARFIQKGGSLVNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIRQPKFGHLKRLHD |
Full Sequence |
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Protein Sequence Length: 790 Download |
MWESLIEKAK MGGLDVVDTY VFWNLHEPSP GIYDFEGRND LVKFIKLVEK AGLYVHLRIG 60 PYICGEWNFG GFPAWLKFVP GISFRTDNEP FKLAMAKFTK KIVQMMKDER LFQSQGGPII 120 LSQIENEYET EDKVFGEAGF AYMNWAAKMA VQMDTGVPWV MCKQDDAPDP MINTCNGFYC 180 DYFSPNKPYK PNFWTEAWTA WFNNFGGPNH KRPVEDLAFG VARFIQKGGS LVNYYMYHGG 240 TNFGRTAGGP FITTSYDYDA PIDEYGLIRQ PKFGHLKRLH DAVKLCEKAL LTGEPHDYTL 300 ATYQKAKVFS SSSGDCAAFL SNYHSNNTAR VTFNGRHYTL PPWSISILPD CKSVIYNTAQ 360 VQVQTNQLSF LPTKVESFSW ETYNENISSI EEDSSMSYDG LLEQLTITKD NSDYLWYTTS 420 VNVDPNESYL RGGKFPTLTA TSKGHGMHVF INGKLAGSSF GTHDNSKFTF TGRINLQAGV 480 NKVSLLSIAG GLPNNGPHYE EREMGVLGPV AIHGLDKGKM DLSRQKWSYK VGLKGENMNL 540 GSPSSVQAVD WAKDSLKQEN AQPLTWYKAY FDAPEGDEPL ALDMGSMQKG QVWINGQNVG 600 RYWTITANGN CTDCSYSGTY RPRKCQFGCG QPTQQWYHVP RSWLMPTKNL IVVFEEVGGN 660 PSRISLVKRS VTSICTEASQ YRPVIKNVHM HQNNGELNEQ NVLKINLHCA AGQFISAIKF 720 ASFGTPSGAC GSHKQGTCHS PKSDYVLQKL CVGRQRCLAT IPTSIFGEDP CPNLRKKLSA 780 EVVCQPVAT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-7 | 2 | 76 | 76 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-17 | 707 | 784 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-19 | 1 | 272 | 330 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-147 | 1 | 283 | 298 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 784 | 785 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91085.1 | 0 | 1 | 789 | 61 | 848 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAF31234.1 | 0 | 1 | 784 | 60 | 842 | beta-D-galactosidase [Persea americana] |
EMBL | CBI38026.1 | 0 | 1 | 789 | 57 | 843 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263382.1 | 0 | 1 | 789 | 1 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274449.1 | 0 | 1 | 789 | 58 | 845 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.99995e-41 | 2 | 279 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.003 | 518 | 674 | 449 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-36 | 2 | 312 | 42 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-36 | 2 | 312 | 42 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 671 | 1 | 671 | 0 |
HO780602 | 663 | 21 | 676 | 0 |
HO795552 | 526 | 61 | 586 | 0 |
HO795552 | 69 | 22 | 89 | 0.00000000000001 |
HO795552 | 22 | 1 | 22 | 0.00000000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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