y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.109660.1 |
Family | CBM43 |
Protein Properties | Length: 465 Molecular Weight: 49845.1 Isoelectric Point: 4.6048 |
Chromosome | Chromosome/Scaffold: 00934 Start: 577351 End: 583752 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 376 | 457 | 3.6e-33 |
WCLPKADIPDDQLQSNLDYACGHGIDCGPIQPGGACFEPNTIQSHAAYAMNLYYQSLGKNPWNCDFSQTATLTSANPSYNAC | |||
GH17 | 31 | 349 | 0 |
IGVNYGQLSDNLPPPSATANLLRSTSISKIRLYNADPLIIKSLANSGLGIVIGIANGDIPALASNPNSAAQWINTNLNPYYPASNILLITVGNEVMSSMD QNLISQLVPAMRNVQNAVNAANLGGKVKVSTVHSMAVLSQSDPPSSGRINPMFEGTMKEVVEFLKENESPFAINPYPFFAYQSDPRDETLAFCLFQPNSG RVDSGNGIKYMNMFDAQLDAVRSALNALGGFKDVEIMVAETGWAYRGDSNEVGTSVENARAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDENLKPGP TSERAFGLFYPNLTMTYDV |
Full Sequence |
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Protein Sequence Length: 465 Download |
MASFSLPFFS FFLFAAASSA VFYIADSQSF IGVNYGQLSD NLPPPSATAN LLRSTSISKI 60 RLYNADPLII KSLANSGLGI VIGIANGDIP ALASNPNSAA QWINTNLNPY YPASNILLIT 120 VGNEVMSSMD QNLISQLVPA MRNVQNAVNA ANLGGKVKVS TVHSMAVLSQ SDPPSSGRIN 180 PMFEGTMKEV VEFLKENESP FAINPYPFFA YQSDPRDETL AFCLFQPNSG RVDSGNGIKY 240 MNMFDAQLDA VRSALNALGG FKDVEIMVAE TGWAYRGDSN EVGTSVENAR AYNGNLIAHL 300 RSMVGTPLMP GKSVDTYIFA LYDENLKPGP TSERAFGLFY PNLTMTYDVG LSKNSQTPTT 360 PTTPTTPSSK PTAPVWCLPK ADIPDDQLQS NLDYACGHGI DCGPIQPGGA CFEPNTIQSH 420 AAYAMNLYYQ SLGKNPWNCD FSQTATLTSA NPSYNACTYP GGST* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-7 | 29 | 342 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-23 | 376 | 446 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-40 | 376 | 459 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-95 | 31 | 349 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 3 | 463 | 2 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 22 | 464 | 15 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 26 | 461 | 54 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 26 | 461 | 54 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 22 | 464 | 19 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 349 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 31 | 352 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 31 | 352 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 31 | 352 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 31 | 352 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |