Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.115600.1 |
Family | GT47 |
Protein Properties | Length: 363 Molecular Weight: 42361.1 Isoelectric Point: 8.0895 |
Chromosome | Chromosome/Scaffold: 00988 Start: 199674 End: 201034 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 31 | 309 | 0 |
FVTEIIFHNRILKHKCRVLEPESATAFYVPFYAGLAVGKFLWTNSTPEERDQHCRSILKWLSDQEYYKRSNGWDHFITMGRITWDFRRSKDKDWGSGCIY LPGMRNITRLLIERNPWDYFDVGVPYPTGFHPKSLNDISAWQEFIRTRRRTHLFCFAGATRAAFHNDFRAMLLHQCKNSTGEKCRVVDCAGSRCSNGTSA ILETFLTSDFCLQPRGDSFTRRSIFDCMVAGAIPVFFWRRTAYYQYEWFLPGEPESYSVFIDRNAVKNGTTSIEAVLER |
Full Sequence |
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Protein Sequence Length: 363 Download |
MANGGFGQKA DSLAGIIPEN LLQSWYWTDQ FVTEIIFHNR ILKHKCRVLE PESATAFYVP 60 FYAGLAVGKF LWTNSTPEER DQHCRSILKW LSDQEYYKRS NGWDHFITMG RITWDFRRSK 120 DKDWGSGCIY LPGMRNITRL LIERNPWDYF DVGVPYPTGF HPKSLNDISA WQEFIRTRRR 180 THLFCFAGAT RAAFHNDFRA MLLHQCKNST GEKCRVVDCA GSRCSNGTSA ILETFLTSDF 240 CLQPRGDSFT RRSIFDCMVA GAIPVFFWRR TAYYQYEWFL PGEPESYSVF IDRNAVKNGT 300 TSIEAVLERF SREEVKEMRE RVIESIPKFI YGTGEVRDAL DVAVEGVLRR FKEQEEWEYK 360 WK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-57 | 16 | 310 | 310 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA97186.1 | 0 | 1 | 357 | 153 | 513 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_201028.1 | 0 | 1 | 362 | 153 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002318866.1 | 0 | 1 | 361 | 147 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 1 | 361 | 151 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 361 | 134 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 348 | 1 | 343 | 0 |
DY267021 | 344 | 5 | 343 | 0 |
DY269151 | 302 | 36 | 337 | 0 |
FC915927 | 295 | 36 | 330 | 0 |
EL434952 | 289 | 2 | 289 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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