| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.116200.1 |
| Family | CBM43 |
| Protein Properties | Length: 450 Molecular Weight: 49880.1 Isoelectric Point: 4.4747 |
| Chromosome | Chromosome/Scaffold: 00995 Start: 116234 End: 118483 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 345 | 426 | 3.1e-27 |
| WCVLNPNVNDWEGLADSVDYACSLSDCTALEYGSSCNQLSAQGNASYAFNMYYQVNSQKSWNCDFDGLAVVTQQDPSYGNCQ | |||
| GH17 | 1 | 322 | 0 |
| VGVNWGTMATHQLPPEKVVKMLQENGFHKLKLFEADDRILEALIGSDIEVMLAIPNSMLFLMSQDPHAAASWVDSNVTAYTYHGGVKIKYVAVGNEPFLK SYNGTYLPLTLPALRNIQQSLNDAGLGSKVKATIPFNADIYNSPDSNPVPSAGEFRPDVRDLTIEILHYLSINNAPFTVNIYPFLSLYGNDYFPIDFAFF DGTAYRPIKDRDLTYTNVFDANFDTLVSALAKAGYPDMKIIVGEVGWPTDGDKHANVQNAKRFNQGLLRHALSGQGTPARVGIIDVYLFSLIDENAKSIE PGSFERHWGIFEFDGKPKYELD | |||
| Full Sequence |
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| Protein Sequence Length: 450 Download |
| VGVNWGTMAT HQLPPEKVVK MLQENGFHKL KLFEADDRIL EALIGSDIEV MLAIPNSMLF 60 LMSQDPHAAA SWVDSNVTAY TYHGGVKIKY VAVGNEPFLK SYNGTYLPLT LPALRNIQQS 120 LNDAGLGSKV KATIPFNADI YNSPDSNPVP SAGEFRPDVR DLTIEILHYL SINNAPFTVN 180 IYPFLSLYGN DYFPIDFAFF DGTAYRPIKD RDLTYTNVFD ANFDTLVSAL AKAGYPDMKI 240 IVGEVGWPTD GDKHANVQNA KRFNQGLLRH ALSGQGTPAR VGIIDVYLFS LIDENAKSIE 300 PGSFERHWGI FEFDGKPKYE LDLAGTEEEK GLIPVEGVRY MGKRWCVLNP NVNDWEGLAD 360 SVDYACSLSD CTALEYGSSC NQLSAQGNAS YAFNMYYQVN SQKSWNCDFD GLAVVTQQDP 420 SYGNCQFPIM IDYTSSSSSS SSFLFLWEL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 8.0e-6 | 240 | 314 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-18 | 344 | 414 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-33 | 345 | 427 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-76 | 1 | 322 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28113.1 | 0 | 1 | 436 | 547 | 955 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189076.1 | 0 | 1 | 437 | 39 | 474 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281500.1 | 0 | 1 | 436 | 29 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324967.1 | 0 | 1 | 436 | 9 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515573.1 | 0 | 2 | 444 | 31 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 1 | 323 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 1 | 323 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 1 | 323 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 1 | 323 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 1 | 323 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797198 | 433 | 1 | 431 | 0 |
| EX345626 | 313 | 80 | 392 | 0 |
| EX343142 | 311 | 117 | 427 | 0 |
| GR410464 | 303 | 82 | 382 | 0 |
| GO360203 | 285 | 1 | 285 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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