| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.117900.1 |
| Family | CBM43 |
| Protein Properties | Length: 490 Molecular Weight: 52896 Isoelectric Point: 6.3165 |
| Chromosome | Chromosome/Scaffold: 00997 Start: 225998 End: 228082 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 363 | 445 | 1.1e-33 |
| WCVPKTDASDEALQKNIDYVCSSGVDCGPIQEGGACYDPNTVRSHASYAMNAYFQTAGRHEFNCDFNHTAILTSTDPSYEACS | |||
| GH17 | 24 | 336 | 0 |
| IGVNYGTVANNLPPPSQVAAFLKSHTSIDRVKIFDANPDILRAFADTGIALTVSVANGDIPALAKLPAAQSWVANNILPFHPTTLINHIAVGNEILATSD KNLIAHLLPAMKAIHSALKLAHISDVKVSTPHSLGILSASEPPSTGRFRRGYDRAIFAPILDFHNQTKTPFMVNPYPFFGFRPATLDYALFKPNPGVFDN ATGKHYTNMFDAQLDAVYSAMKKVGYGDVDIVVAETGWPSAGDPNQAGVSMENAISYNRNLVKHVNSGKGTPLMPNRTFETYIFSLFNENLKPSTSERNY GLFQPDFTPVYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MAYSLFFSLL LFFFIPLSSA AYSIGVNYGT VANNLPPPSQ VAAFLKSHTS IDRVKIFDAN 60 PDILRAFADT GIALTVSVAN GDIPALAKLP AAQSWVANNI LPFHPTTLIN HIAVGNEILA 120 TSDKNLIAHL LPAMKAIHSA LKLAHISDVK VSTPHSLGIL SASEPPSTGR FRRGYDRAIF 180 APILDFHNQT KTPFMVNPYP FFGFRPATLD YALFKPNPGV FDNATGKHYT NMFDAQLDAV 240 YSAMKKVGYG DVDIVVAETG WPSAGDPNQA GVSMENAISY NRNLVKHVNS GKGTPLMPNR 300 TFETYIFSLF NENLKPSTSE RNYGLFQPDF TPVYDVGILQ NPPAMGPTSP VGGPKPSDEE 360 REWCVPKTDA SDEALQKNID YVCSSGVDCG PIQEGGACYD PNTVRSHASY AMNAYFQTAG 420 RHEFNCDFNH TAILTSTDPS YEACSYPFDE EKLTEKSVAS GATIRCRMVG AVALARACIA 480 VVAGGVLLI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 195 | 329 | 139 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-23 | 363 | 433 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-42 | 363 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-95 | 24 | 336 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002283647.1 | 0 | 4 | 446 | 8 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002283660.1 | 0 | 4 | 446 | 8 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002298356.1 | 0 | 18 | 440 | 21 | 447 | glycoside hydrolase [Populus trichocarpa] |
| RefSeq | XP_002312097.1 | 0 | 5 | 446 | 14 | 447 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532848.1 | 0 | 16 | 482 | 17 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 24 | 336 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 24 | 336 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 24 | 336 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 24 | 336 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 24 | 336 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
