| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.126850.1 |
| Family | CBM57 |
| Protein Properties | Length: 622 Molecular Weight: 68098.6 Isoelectric Point: 8.174 |
| Chromosome | Chromosome/Scaffold: 01017 Start: 674439 End: 679789 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 208 | 359 | 2.1e-24 |
| DADSHGNHWGGDRFWTAIKTFGQQSDRIISVENSIKQASISPNFYPEALYRSALVSTDSQPELTYVMDVDPNRNYSIWLHFAEIDGSIRNVGQRIFDILI NGDVAFPNVDILKLTGGHYTALVLNSTVAVNGRTLTITLQPKEGSYAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MLRFILLCLL IHGFLFSLSS ARPLPFALRI SCGARNDVHT PPTNTPWFKD FAYTGGIPAN 60 ATRPSFISPP LKTLRYFPLY TGPENCYIIN RVPRGHYSVR IFFGLVNQNN FDTEPLFDVS 120 VEGTQFCSLK SGWSNNDEQT FAEALVFLTD GSASICFHST GHGDPAILAI EILQIDEKAY 180 YFGPNWGEGV ILRTATRLSC GDGKPKFDAD SHGNHWGGDR FWTAIKTFGQ QSDRIISVEN 240 SIKQASISPN FYPEALYRSA LVSTDSQPEL TYVMDVDPNR NYSIWLHFAE IDGSIRNVGQ 300 RIFDILINGD VAFPNVDILK LTGGHYTALV LNSTVAVNGR TLTITLQPKE GSYAIINAIE 360 VFEVVSAEVK TSPNEVRALR SLKKALALPV RLGWNGDPCV PQQHPWSGAD CQYDKVGNKW 420 VIDGLGLDNQ GLTGFLPNET SQLRHLQSIN LSGNSIHGPI PASLGTIAKL EVLDLSYNFF 480 NGSIPESLGQ LTSLRTLNLN GNSLSGRVPA ALGARLLHRA SFNFTDNAGL CGIPGLPACG 540 PHLSAGAKIG IAFGALIIFL LIITFAVCCW KRRQNILRAQ NAARAAPYAK ARTQLSRDIQ 600 MTMHHNQGHT RTPNENGRLI S* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-13 | 425 | 539 | 118 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-13 | 425 | 513 | 89 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-18 | 197 | 359 | 175 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-65 | 30 | 364 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 1 | 617 | 620 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABH07898.1 | 0 | 28 | 617 | 1 | 594 | leucine-rich repeat family protein [Solanum lycopersicum] |
| EMBL | CBI30598.1 | 0 | 25 | 617 | 24 | 619 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279791.1 | 0 | 28 | 617 | 1 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 28 | 617 | 1 | 591 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 617 | 1 | 624 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.0000000000004 | 397 | 546 | 611 | 755 | A Chain A, Solution Structure Of Rsgi Ruh-001, A Fis1p-Like And Cgi- 135 Homologous Domain From A Mouse Cdna |
| PDB | 3rgz_A | 0.0000000004 | 419 | 512 | 393 | 486 | A Chain A, Solution Structure Of Rsgi Ruh-001, A Fis1p-Like And Cgi- 135 Homologous Domain From A Mouse Cdna |
| PDB | 3rgz_A | 0.000000003 | 362 | 512 | 427 | 558 | A Chain A, Solution Structure Of Rsgi Ruh-001, A Fis1p-Like And Cgi- 135 Homologous Domain From A Mouse Cdna |
| PDB | 3rgz_A | 0.0000004 | 432 | 513 | 454 | 535 | A Chain A, Solution Structure Of Rsgi Ruh-001, A Fis1p-Like And Cgi- 135 Homologous Domain From A Mouse Cdna |
| PDB | 3rgz_A | 0.001 | 425 | 514 | 348 | 440 | A Chain A, Solution Structure Of Rsgi Ruh-001, A Fis1p-Like And Cgi- 135 Homologous Domain From A Mouse Cdna |
