Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.127590.1 |
Family | GH5 |
Protein Properties | Length: 419 Molecular Weight: 48041.5 Isoelectric Point: 10.2316 |
Chromosome | Chromosome/Scaffold: 01019 Start: 161909 End: 164035 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 34 | 356 | 2.2e-31 |
NGSPYYANGFNAYWLMYVASDPSQRSKVSAVFREASSHGLTVARTWAFSDGGYRPLQYSPGNYNEQMFQGMDFVVAEARRFGIKLILSLVNNYENFGGKK QYVNWARSKGQYLNSDDDFFRNPVVKGFYKNHIRTVLNRYNRFTTIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIMEMASFVKSIDRNHLLEAGLEG FYGHSSPQRMRLNPGFNIGTDFIANNRIPGIDFATLHSYPDQWLSSSNDQYQLSFLNNWISTHIQDAESILRKPILLTEFGKSWKVPGYSTNERDLLFNT VYSKIYASARRGGAAAGGLFWQL |
Full Sequence |
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Protein Sequence Length: 419 Download |
MKLWVLALLL AIFIHGVAGG DGFVRTGRTR FLLNGSPYYA NGFNAYWLMY VASDPSQRSK 60 VSAVFREASS HGLTVARTWA FSDGGYRPLQ YSPGNYNEQM FQGMDFVVAE ARRFGIKLIL 120 SLVNNYENFG GKKQYVNWAR SKGQYLNSDD DFFRNPVVKG FYKNHIRTVL NRYNRFTTIH 180 YKDDPTIMAW ELMNEPRCTS DPSGRTIQAW IMEMASFVKS IDRNHLLEAG LEGFYGHSSP 240 QRMRLNPGFN IGTDFIANNR IPGIDFATLH SYPDQWLSSS NDQYQLSFLN NWISTHIQDA 300 ESILRKPILL TEFGKSWKVP GYSTNERDLL FNTVYSKIYA SARRGGAAAG GLFWQLLTEG 360 MDSFRDGYEI ILSQNPSTAN VITQQSRRLY QIRRIYARMR NIERWKRARA ARGRRIGN* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.001 | 133 | 314 | 199 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-27 | 31 | 320 | 292 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32548.1 | 0 | 14 | 418 | 21 | 433 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
GenBank | ABY58035.1 | 0 | 14 | 418 | 21 | 433 | mannase [Prunus salicina] |
GenBank | ACN78662.1 | 0 | 1 | 403 | 1 | 409 | endo-beta-mannanase [Actinidia arguta] |
RefSeq | XP_002264115.1 | 0 | 17 | 418 | 23 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281804.1 | 0 | 1 | 412 | 1 | 418 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 21 | 392 | 4 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 28 | 387 | 17 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 28 | 387 | 17 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 28 | 387 | 17 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 28 | 387 | 17 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |