| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.128330.1 |
| Family | CBM49 |
| Protein Properties | Length: 596 Molecular Weight: 65730.1 Isoelectric Point: 6.1571 |
| Chromosome | Chromosome/Scaffold: 01024 Start: 366742 End: 370188 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 503 | 582 | 1.8e-28 |
| VEFIHTITSTWTVNKESYYRHQVKIKNTSGKSIKNLKLQLDNLTGPIWGLSPTQQKGVYELPTWLTVLQPGSECAFIYIQ | |||
| GH9 | 26 | 485 | 0 |
| NYGDALDLSFLYLEAQRSGKLPVDRRVKWRGDSGLKDGFAQGVNLVGGYYDAGDNVKFGLPMAFVATILSWGAIDFNKEITNANQMDNTLKAIKWATDYF LKAHTQRNVLWGQVGDGSSDHFCWERPEDMTTPRTAFKIDESHPGSDLAGETAAALAAASIAFKTYNSAYSNLLLAHAKELFTFADTFRGLYDDSIPCVS GFYTSSGYWDELLWAATWLFRATGDEYYLKYTVDKAVSFGGTGWAMKEFSWDNKYAGVQVLLTKVLLEGRGGGYESTLKQYQAKADYFACACLEKNDGFN INKTPGGLLYAHEWNNMQYASTAAFLMAVYSDYLSTANAKLICPDGVFEPKELLNFAQSQADYILGKNPNSLSYLIGYGPKFPQKLHHRGSSIASIFTDP VPVGCVQGFDTWYHRPQGNPNILHGALVGGPDKNDRFGDERSDYEQTEPTLTASAPLIGL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MAQGFLLALV VAVLCFEAAT AVGEFNYGDA LDLSFLYLEA QRSGKLPVDR RVKWRGDSGL 60 KDGFAQGVNL VGGYYDAGDN VKFGLPMAFV ATILSWGAID FNKEITNANQ MDNTLKAIKW 120 ATDYFLKAHT QRNVLWGQVG DGSSDHFCWE RPEDMTTPRT AFKIDESHPG SDLAGETAAA 180 LAAASIAFKT YNSAYSNLLL AHAKELFTFA DTFRGLYDDS IPCVSGFYTS SGYWDELLWA 240 ATWLFRATGD EYYLKYTVDK AVSFGGTGWA MKEFSWDNKY AGVQVLLTKV LLEGRGGGYE 300 STLKQYQAKA DYFACACLEK NDGFNINKTP GGLLYAHEWN NMQYASTAAF LMAVYSDYLS 360 TANAKLICPD GVFEPKELLN FAQSQADYIL GKNPNSLSYL IGYGPKFPQK LHHRGSSIAS 420 IFTDPVPVGC VQGFDTWYHR PQGNPNILHG ALVGGPDKND RFGDERSDYE QTEPTLTASA 480 PLIGLFSKLH SSVNGHQIPG SPVEFIHTIT STWTVNKESY YRHQVKIKNT SGKSIKNLKL 540 QLDNLTGPIW GLSPTQQKGV YELPTWLTVL QPGSECAFIY IQEGPQAKVT VSSYH* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 17 | 595 | 594 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 21 | 594 | 605 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 18 | 489 | 474 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 26 | 489 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 26 | 487 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 5 | 595 | 9 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 25 | 595 | 29 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 31 | 595 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 17 | 595 | 19 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 6 | 595 | 8 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 25 | 473 | 3 | 412 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1ksc_A | 0 | 25 | 473 | 3 | 412 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 1ks8_A | 0 | 25 | 473 | 3 | 412 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 21 | 490 | 20 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 25 | 547 | 4 | 488 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
