Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.129000.1 |
Family | GH5 |
Protein Properties | Length: 484 Molecular Weight: 54928.2 Isoelectric Point: 6.0532 |
Chromosome | Chromosome/Scaffold: 01028 Start: 103038 End: 105767 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 14 | 294 | 1.9e-35 |
LANEVVRLRFNCVRLTYATHMFTRYANRTVEENFDLLDLRAAKVGLAFHNPFVLNMTIFEAYEAVVDVLGTSGLMVIADNHISQPRWCCSLEDGNGFFGD RYFDTEEWLEGLRLVARRFYNKSAVVAMSLRNELRGASSKSKDWNKYITQGATTIHNINPKILVIISGLNFDNDLRCQRQYPLQLNNLHNKLVFEVHLYS FSGESQSKFIHNPLNKICSKVINGFVERAEFVMEGAEAVPLFVSEFGLDQRGVNEADDRFLSCFSAHLVEKDLDWALWGWQ |
Full Sequence |
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Protein Sequence Length: 484 Download |
MLIEGLDRRP LKDLANEVVR LRFNCVRLTY ATHMFTRYAN RTVEENFDLL DLRAAKVGLA 60 FHNPFVLNMT IFEAYEAVVD VLGTSGLMVI ADNHISQPRW CCSLEDGNGF FGDRYFDTEE 120 WLEGLRLVAR RFYNKSAVVA MSLRNELRGA SSKSKDWNKY ITQGATTIHN INPKILVIIS 180 GLNFDNDLRC QRQYPLQLNN LHNKLVFEVH LYSFSGESQS KFIHNPLNKI CSKVINGFVE 240 RAEFVMEGAE AVPLFVSEFG LDQRGVNEAD DRFLSCFSAH LVEKDLDWAL WGWQGSYYYR 300 QGKVGPEEVF GVLNYNWSDV RNPHFSQMFQ LLQTMLQDPN SNSSNTYVMY HPQSGQCVLV 360 QDMKHMQIYL NDCSNASHWS YEGDGTPIML ASTNFCLKAS GDGLPPSLSR DCFGEQSVWT 420 AISDSKLHLA TLTKQGNNGM CLEKESSNSS RILMRSCVCV GNDSNCLQDT QAQWFQLVVT 480 NTL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.008 | 62 | 299 | 270 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 1.0e-10 | 70 | 293 | 233 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD32354.1 | 0 | 1 | 481 | 57 | 534 | Glycoside hydrolase, family 5; Ricin B-related lectin [Medicago truncatula] |
EMBL | CBI34404.1 | 0 | 1 | 481 | 73 | 559 | unnamed protein product [Vitis vinifera] |
EMBL | CBI34407.1 | 0 | 1 | 481 | 1 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272534.1 | 0 | 1 | 481 | 57 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509879.1 | 0 | 1 | 481 | 57 | 534 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.00000000002 | 2 | 293 | 37 | 321 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.00000000002 | 2 | 293 | 37 | 321 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.00000000002 | 2 | 293 | 37 | 321 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.00000000002 | 2 | 293 | 37 | 321 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 4dm2_C | 0.000002 | 2 | 222 | 44 | 276 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY827372 | 312 | 25 | 335 | 0 |
DR181177 | 269 | 70 | 337 | 0 |
CO164858 | 272 | 55 | 325 | 0 |
CV138903 | 287 | 1 | 284 | 0 |
DR165798 | 261 | 78 | 337 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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