Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.132030.1 |
Family | GT14 |
Protein Properties | Length: 421 Molecular Weight: 48032.9 Isoelectric Point: 8.335 |
Chromosome | Chromosome/Scaffold: 01037 Start: 109865 End: 113779 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 74 | 329 | 0 |
LAYLISGSTGDGKSLKRALKALYHPRNHYVVHLDLEAPAAERLELADFVNNEPLFRSVGNVRMILRANLVTYRGPTMVTNTLHAAAILLKDGGDWDWFIN LSASDYPLVTQDDLLHTLIPIPRNLNFIEHTSDIGWKEYQRAKPVIIDPGLYSLHKSDVYWVSEKRSIPTAYKLFTGSAWMMLSRPFVEYCLWGWDNLPR VALMYYANFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLNLDD |
Full Sequence |
---|
Protein Sequence Length: 421 Download |
METNNKLQKK KKWFIPLVFS LLLTTLVVFV SIFISPHFSS SQFNRTHLMK NRIPRFVESK 60 LAVSKTSSDS VPRLAYLISG STGDGKSLKR ALKALYHPRN HYVVHLDLEA PAAERLELAD 120 FVNNEPLFRS VGNVRMILRA NLVTYRGPTM VTNTLHAAAI LLKDGGDWDW FINLSASDYP 180 LVTQDDLLHT LIPIPRNLNF IEHTSDIGWK EYQRAKPVII DPGLYSLHKS DVYWVSEKRS 240 IPTAYKLFTG SAWMMLSRPF VEYCLWGWDN LPRVALMYYA NFLSSPEGYF HTVICNADEF 300 RNTTVNHDLH FISWDNPPKQ HPHFLNLDDF QHMVDSNAPF GRKFGHGDPV LDKIDSDLLR 360 CNSDGYFPGD WFNLFQNSST SSIHDITNTT NLRPGPSAKR LKHLIDGLLT APDFHTSHCV 420 * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 8.0e-71 | 74 | 334 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 38 | 420 | 386 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27730.1 | 0 | 62 | 420 | 3 | 361 | unknown [Zea mays] |
EMBL | CBI28190.1 | 0 | 39 | 420 | 113 | 472 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001130420.1 | 0 | 11 | 420 | 24 | 439 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002285159.1 | 0 | 39 | 420 | 47 | 429 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 41 | 419 | 47 | 428 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000005 | 88 | 294 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000005 | 88 | 294 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000005 | 88 | 294 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000005 | 88 | 294 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000001 | 88 | 294 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |