Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.132200.1 |
Family | GH17 |
Protein Properties | Length: 345 Molecular Weight: 37950.1 Isoelectric Point: 6.2592 |
Chromosome | Chromosome/Scaffold: 01037 Start: 229051 End: 230085 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 11 | 329 | 0 |
GINYGRIADNIPSPDEVVSLLKAAKIKNVRIYDADHKVLKAFSGTGLELVVGLPNGFLREMSASEEHAMNWVKENVQAFLPETHICGIAIGNEVLGGGDL ELWGTLLGAAKNIYKAVKNLNLDGVVQITTAHSQAVFWNSFPPSSCIFRENVVQYMKPLLEFLSEIGSPFCLNAYPFLAYMSDPENIDINYALFESTKGI FDPKTGLHYDNMLDAQIDAAYAALADAGYQKMEVIVTETGWASRGDENEAAATASNARIFNYNLRKRLAKKKGTPFRPKNALKAYIFATFNENLKPGPTS ERNFGLFKADGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 345 Download |
MTVQAFTGTY GINYGRIADN IPSPDEVVSL LKAAKIKNVR IYDADHKVLK AFSGTGLELV 60 VGLPNGFLRE MSASEEHAMN WVKENVQAFL PETHICGIAI GNEVLGGGDL ELWGTLLGAA 120 KNIYKAVKNL NLDGVVQITT AHSQAVFWNS FPPSSCIFRE NVVQYMKPLL EFLSEIGSPF 180 CLNAYPFLAY MSDPENIDIN YALFESTKGI FDPKTGLHYD NMLDAQIDAA YAALADAGYQ 240 KMEVIVTETG WASRGDENEA AATASNARIF NYNLRKRLAK KKGTPFRPKN ALKAYIFATF 300 NENLKPGPTS ERNFGLFKAD GSISYDIGFH GLKYSSSDSS YLSLK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 8 | 320 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-87 | 11 | 329 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67102.1 | 0 | 5 | 339 | 28 | 362 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAY25165.1 | 0 | 4 | 345 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | XP_002282272.1 | 0 | 1 | 345 | 24 | 366 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 2 | 337 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 1 | 331 | 8 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 11 | 329 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_C | 0 | 11 | 329 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_B | 0 | 11 | 329 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_A | 0 | 11 | 329 | 3 | 315 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3em5_D | 0 | 11 | 329 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EL455956 | 297 | 5 | 301 | 0 |
ES912714 | 275 | 5 | 279 | 0 |
JK494821 | 220 | 4 | 223 | 0 |
CO114700 | 266 | 1 | 266 | 0 |
FY444355 | 267 | 64 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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