| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.139490.1 |
| Family | CBM43 |
| Protein Properties | Length: 490 Molecular Weight: 54233.7 Isoelectric Point: 7.8082 |
| Chromosome | Chromosome/Scaffold: 01066 Start: 687258 End: 689930 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 372 | 451 | 2e-24 |
| WCVLNNNKDLSNASARALEACSVADCTALAPGASCSNIGWPGNISYAFNSYYQQNDQRPESCDFQGLALITTIDPSNNNC | |||
| GH17 | 29 | 352 | 0 |
| LGFNWGTSASHPLSPFKVVQLLNSNNITKIKLLDPNPLVLQALSASTLQLTIAIPNPMLKLLNSSRKAAESWVHDNVTRYLSGGTGGVRIEYIAVGDEPF LLSYGDEYYPYVMGAVANIQAAITKVNLESRIKVVVPCSYDAFLSESGLPSKGHFRPELNKTMIQLLTFLTAHRSPFFASISPFLSFLQNKNISLDFALF KETARPHNDSHRTYKNSFELSYDTLVASLSKIGFSTVDIVVEQVGWPTDGADNANSSTAETFMKGLLDYLHSRSGSPLRPRRPPLETYILSLLDEDRRNI STGPFERHWGVFTFDGQAKYHLNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 490 Download |
| MPPTLSLILF FFFLFLNLSA LTFSPVSALG FNWGTSASHP LSPFKVVQLL NSNNITKIKL 60 LDPNPLVLQA LSASTLQLTI AIPNPMLKLL NSSRKAAESW VHDNVTRYLS GGTGGVRIEY 120 IAVGDEPFLL SYGDEYYPYV MGAVANIQAA ITKVNLESRI KVVVPCSYDA FLSESGLPSK 180 GHFRPELNKT MIQLLTFLTA HRSPFFASIS PFLSFLQNKN ISLDFALFKE TARPHNDSHR 240 TYKNSFELSY DTLVASLSKI GFSTVDIVVE QVGWPTDGAD NANSSTAETF MKGLLDYLHS 300 RSGSPLRPRR PPLETYILSL LDEDRRNIST GPFERHWGVF TFDGQAKYHL NFGQRTKNLV 360 NAQNVEYLSP KWCVLNNNKD LSNASARALE ACSVADCTAL APGASCSNIG WPGNISYAFN 420 SYYQQNDQRP ESCDFQGLAL ITTIDPSNNN CRFPVQIRTS NSQSLDASFL LKAIPLSAVF 480 WLSQIVYLQ* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-14 | 371 | 439 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-28 | 371 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-56 | 29 | 352 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 29 | 465 | 35 | 468 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 26 | 486 | 20 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 20 | 470 | 17 | 461 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 14 | 478 | 11 | 477 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 26 | 476 | 19 | 469 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 45 | 352 | 18 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3f55_C | 0 | 45 | 352 | 18 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3f55_B | 0 | 45 | 352 | 18 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3f55_A | 0 | 45 | 352 | 18 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3em5_D | 0 | 45 | 352 | 18 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
