| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.139770.1 |
| Family | GT19 |
| Protein Properties | Length: 475 Molecular Weight: 53065.4 Isoelectric Point: 9.3241 |
| Chromosome | Chromosome/Scaffold: 01066 Start: 1058756 End: 1062176 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 48 | 430 | 0 |
| VFIVAGEVSGDTIASRLMASLRTLSPVPVNFSGVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLKSIREKLKRTVEAAIVFEPHVIVTVDSKGFSFRLL KQIRARYRRYKMDGPLHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDLNVGKDASLIELKIRGSCKDFLIK NNISDDATIISLLPGSRLQEVSRMIPIYLSTMELLKESFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYDAFSASKVALCTSGTVVTE LQLARLPCVVAYRAHFLTEWFIRRKANVSYISLPNILLNSPVIPEALFQDCTPAKLHSMIKELICNNGLRNKQVVAAKEVLKL | |||
| Full Sequence |
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| Protein Sequence Length: 475 Download |
| MLWMNCKCCL QPQRVMQSLL NNTRRYFSYY RVAANAFEMA AKHGELRVFI VAGEVSGDTI 60 ASRLMASLRT LSPVPVNFSG VGGPMMSKQG LTSLFLMEDI AVMGIWELFS HLKSIREKLK 120 RTVEAAIVFE PHVIVTVDSK GFSFRLLKQI RARYRRYKMD GPLHFHYVAP SFWAWKGGEE 180 RLKGLVEFVD HILCILPNEE EVCKSNRLAA TFVGHPILED ALDLNVGKDA SLIELKIRGS 240 CKDFLIKNNI SDDATIISLL PGSRLQEVSR MIPIYLSTME LLKESFPELI TIIHVAPNQH 300 VQDYINGVLH KWPVPAILVA GGSPQAKYDA FSASKVALCT SGTVVTELQL ARLPCVVAYR 360 AHFLTEWFIR RKANVSYISL PNILLNSPVI PEALFQDCTP AKLHSMIKEL ICNNGLRNKQ 420 VVAAKEVLKL LSSSKDNMKF LAKEGLKCTS SMCTPSMIAA SAILFYKRTP ESIL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 1.0e-40 | 49 | 439 | 401 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 1.0e-50 | 48 | 413 | 368 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-68 | 48 | 444 | 403 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 8.0e-92 | 46 | 464 | 425 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-98 | 46 | 435 | 407 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 39 | 468 | 1 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 25 | 468 | 22 | 463 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 23 | 468 | 18 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 25 | 468 | 2 | 443 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 14 | 464 | 7 | 464 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 301 | 85 | 382 | 0 |
| JG864023 | 279 | 130 | 408 | 0 |
| EE622357 | 258 | 95 | 352 | 0 |
| DC601543 | 205 | 176 | 380 | 0 |
| EY717263 | 44 | 343 | 386 | 0.000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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