Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.146880.2 |
Family | GH3 |
Protein Properties | Length: 620 Molecular Weight: 67826.5 Isoelectric Point: 5.9467 |
Chromosome | Chromosome/Scaffold: 01100 Start: 232841 End: 239377 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 99 | 335 | 0 |
LQSRLGIPIIYGIDAVHGSSNVYGATIFPHNVGLGATRDGKLVRRIGTVTALEVRASGVHYAFAPCLAVSRDPRWGRCYESYSEHTEVVRKMTSLVEGLQ GKPPEGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIIDSYDELERIHIAPYLDCIAQGLSTVMASYSSWNGNPLHTHHFLLTQVLKEKLGFKG FVISDWEALDRLSNPRGSNYRSCICTAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 620 Download |
MRWMKLGKGK EEEMESKNDC MYRNPGAAIE DRIKDLLSRM SLREKIGQMT QIERSVVTPS 60 ALTDLAVGSV LSGGDNPPFD KAMSLDWADM VDGFQSLALQ SRLGIPIIYG IDAVHGSSNV 120 YGATIFPHNV GLGATRDGKL VRRIGTVTAL EVRASGVHYA FAPCLAVSRD PRWGRCYESY 180 SEHTEVVRKM TSLVEGLQGK PPEGYPKGYP FVAGRNNVIA CAKHFVGDGG TDKGLNEGNT 240 IIDSYDELER IHIAPYLDCI AQGLSTVMAS YSSWNGNPLH THHFLLTQVL KEKLGFKGFV 300 ISDWEALDRL SNPRGSNYRS CICTAVNAGI DMVMVPFRYE EFIKDLLSLV ESGEIPIARI 360 DDAVERILRV KFVAGLFEHP FSDRSLIDVV GCKIHRDLAR EAVRKSLVLL RNGKDPMKPF 420 LPLDRKAKKI LVAGSHADDL GYQCGGWTIS WNGSTGRTTV DAIKEAVGDQ TKVIYEQNPS 480 AVTLNDQDIS FAIVAIGESP YAESAGDNSK LIIPFNGNEI VKAVAGKIPT LVILISGRPL 540 VLEPTVIENV EALIAAWLPG TEGNGITDVI FGDYDFTGRL PVTWFKTVEQ LPVHAENNLQ 600 DSLFPFGFGL SYGKEISSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-32 | 24 | 614 | 650 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-52 | 407 | 613 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-83 | 41 | 370 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 4.0e-85 | 40 | 449 | 423 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 4.0e-85 | 24 | 612 | 670 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 19 | 615 | 2 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 40 | 615 | 1 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 5 | 615 | 104 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 14 | 611 | 1 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 20 | 611 | 4 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 21 | 611 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1x38_A | 0 | 21 | 611 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1lq2_A | 0 | 21 | 611 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 21 | 611 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 21 | 611 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 329 | 148 | 471 | 0 |
HO784016 | 429 | 68 | 490 | 0 |
EL455042 | 312 | 78 | 389 | 0 |
FC882555 | 291 | 148 | 438 | 0 |
HO784016 | 48 | 22 | 69 | 0.000005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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