Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.146890.1 |
Family | GH3 |
Protein Properties | Length: 610 Molecular Weight: 66625.1 Isoelectric Point: 5.6816 |
Chromosome | Chromosome/Scaffold: 01100 Start: 240018 End: 245674 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 320 | 0 |
QSRLGIPIIYGSDAVHGNNNVYGATIFPHNVGLGATRDADLVRRIGTVTALEVRASGIHYAFAPCVAVSRDPRWGRCYESYSEDTEVVRKMTCLVEGLQG KPPTGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGLNEGNTIASYDELERIHMAPYLDCIAQGVSTVMASYSSWNGRPLHADHFLLTQILKNKLGFKGFV ISDWQGLDRLSRPRGSNYRLCISAAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 610 Download |
MEATDCVYKN SSAPIEVRIK DLLSRMTLRE KIGQMTQIER TVATPSALGD FAIGSVLNAG 60 GSAPFRGALS SDWADMIDRF QSWAIQSRLG IPIIYGSDAV HGNNNVYGAT IFPHNVGLGA 120 TRDADLVRRI GTVTALEVRA SGIHYAFAPC VAVSRDPRWG RCYESYSEDT EVVRKMTCLV 180 EGLQGKPPTG YPKGYPFVAG RNNVIACAKH FVGDGGTDKG LNEGNTIASY DELERIHMAP 240 YLDCIAQGVS TVMASYSSWN GRPLHADHFL LTQILKNKLG FKGFVISDWQ GLDRLSRPRG 300 SNYRLCISAA VNAGIDMVMV PLRYEQFIKD LLFLVESGEI PMTRIDDAVE RILRVKFVSG 360 VFEHPFSDRS LLDVVGCKIH RDLAREAVRK SLVLLKNGKD PTKPFLPLDM KAKKILVAGS 420 HADDLGYQCG GWTISWDGMT GRITIGTTIL DAIKEAVGDQ TEVIYEQNPS AATLNDQDIS 480 FAIVAIGESP YAEFTGDDSK LVIPFNGNDI VKAVAGKMPT LVILVSGRPL ILEPTVMENA 540 EALIAAWLPG SEGSGITDVI FGDYDFTGRL PITWFRTVEQ LPVHAENNLQ ESLFPFGFGL 600 SYDKEKSPQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-33 | 10 | 604 | 660 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-47 | 392 | 603 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-85 | 27 | 355 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-87 | 19 | 602 | 655 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 4.0e-90 | 26 | 434 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 5 | 605 | 2 | 635 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_190284.1 | 0 | 1 | 601 | 3 | 604 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 1 | 605 | 110 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 1 | 607 | 1 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 6 | 605 | 4 | 603 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 7 | 606 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 7 | 606 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 7 | 606 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 7 | 606 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 7 | 606 | 4 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 328 | 134 | 461 | 0 |
HO784016 | 428 | 54 | 480 | 0 |
FC882555 | 290 | 134 | 423 | 0 |
EL455042 | 314 | 61 | 374 | 0 |
HO784016 | 48 | 8 | 55 | 0.00000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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