Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.146890.3 |
Family | GH3 |
Protein Properties | Length: 492 Molecular Weight: 54032.8 Isoelectric Point: 5.2336 |
Chromosome | Chromosome/Scaffold: 01100 Start: 240018 End: 243618 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 4 | 202 | 0 |
RDADLVRRIGTVTALEVRASGIHYAFAPCVAVSRDPRWGRCYESYSEDTEVVRKMTCLVEGLQGKPPTGYPKGYPFVAGRNNVIACAKHFVGDGGTDKGL NEGNTIASYDELERIHMAPYLDCIAQGVSTVMASYSSWNGRPLHADHFLLTQILKNKLGFKGFVISDWQGLDRLSRPRGSNYRLCISAAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 492 Download |
MDDRDADLVR RIGTVTALEV RASGIHYAFA PCVAVSRDPR WGRCYESYSE DTEVVRKMTC 60 LVEGLQGKPP TGYPKGYPFV AGRNNVIACA KHFVGDGGTD KGLNEGNTIA SYDELERIHM 120 APYLDCIAQG VSTVMASYSS WNGRPLHADH FLLTQILKNK LGFKGFVISD WQGLDRLSRP 180 RGSNYRLCIS AAVNAGIDMV MVPLRYEQFI KDLLFLVESG EIPMTRIDDA VERILRVKFV 240 SGVFEHPFSD RSLLDVVGCK IHRDLAREAV RKSLVLLKNG KDPTKPFLPL DMKAKKILVA 300 GSHADDLGYQ CGGWTISWDG MTGRITIGTT ILDAIKEAVG DQTEVIYEQN PSAATLNDQD 360 ISFAIVAIGE SPYAEFTGDD SKLVIPFNGN DIVKAVAGKM PTLVILVSGR PLILEPTVME 420 NAEALIAAWL PGSEGSGITD VIFGDYDFTG RLPITWFRTV EQLPVHAENN LQESLFPFGF 480 GLSYDKEKSP Q* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-27 | 8 | 486 | 532 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-48 | 274 | 485 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 9.0e-66 | 4 | 237 | 236 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 4.0e-72 | 4 | 316 | 318 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 9.0e-73 | 5 | 484 | 549 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 4 | 487 | 150 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 4 | 487 | 97 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 4 | 487 | 231 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 4 | 489 | 116 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 4 | 487 | 120 | 603 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 4 | 488 | 119 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 4 | 488 | 119 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 4 | 488 | 119 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 4 | 488 | 119 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 4 | 488 | 119 | 603 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 328 | 16 | 343 | 0 |
FC882555 | 290 | 16 | 305 | 0 |
GO800387 | 338 | 53 | 389 | 0 |
GO876678 | 319 | 114 | 432 | 0 |
EL452836 | 294 | 4 | 297 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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