Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.149200.1 |
Family | CE8 |
Protein Properties | Length: 562 Molecular Weight: 61862.9 Isoelectric Point: 8.8523 |
Chromosome | Chromosome/Scaffold: 01110 Start: 64568 End: 68083 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 250 | 545 | 0 |
DVVVAADGSGDFRTISEAVAAAPSRSSRRYIIRIKAGVYRENVNVASSKRNIMFWGDGRVNTIITGNRNVVDGSTTFNSATVAAVGERFLARDVTFQNTA GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSNRQFYVQCIIVGTIDFIFGNAAAVIQDCDIHARRPNPGQRNMVTAQGRTDPNQNTGIVIQKCRIG TTSDLRPVISNFPTFLGRPWQRYSRTVVMQTSISNVIDPAGWHVWDGNFALDTLFYAEYQNSGAGADTSRRVKWKGFRVLTRAAEAEAFTAGNFIG |
Full Sequence |
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Protein Sequence Length: 562 Download |
MSKPDDTPAA GVPFSGYSKT NLLVFALSTT LLLAVVSSDD HVGSKCAMTL YPELCETTIS 60 TAVGSSSKEA IEASVNITIS AVKDNYKRVQ KLLKTVKNLT KRQKIAFHDC LETGEETLRE 120 LYEVVEDVNE YPKKKSLSRY ADDLKTLLSS TITNQETCVD GFSHDKGDKK VRESLKEGLI 180 HIEKLCSIAL ALIKNLTDTD IANLNNNNNN NHLNRKQLEE KKMEDGIKWP DWMSPKDRRL 240 LQASSTATPD VVVAADGSGD FRTISEAVAA APSRSSRRYI IRIKAGVYRE NVNVASSKRN 300 IMFWGDGRVN TIITGNRNVV DGSTTFNSAT VAAVGERFLA RDVTFQNTAG PSKHQAVALR 360 VGSDLSAFYR CDMLAYQDTL YVHSNRQFYV QCIIVGTIDF IFGNAAAVIQ DCDIHARRPN 420 PGQRNMVTAQ GRTDPNQNTG IVIQKCRIGT TSDLRPVISN FPTFLGRPWQ RYSRTVVMQT 480 SISNVIDPAG WHVWDGNFAL DTLFYAEYQN SGAGADTSRR VKWKGFRVLT RAAEAEAFTA 540 GNFIGGGTWL SSTGFPFSLG L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 1.0e-152 | 43 | 561 | 539 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 3.0e-157 | 46 | 561 | 524 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-169 | 102 | 561 | 461 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 44 | 561 | 525 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 250 | 546 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF23892.1 | 0 | 33 | 561 | 51 | 576 | AF152172_1 pectin methyl esterase [Solanum tuberosum] |
GenBank | AAO85706.1 | 0 | 37 | 561 | 44 | 579 | pectin methyl-esterase [Nicotiana benthamiana] |
EMBL | CAB95025.1 | 0 | 37 | 561 | 44 | 579 | pectin methylesterase [Nicotiana tabacum] |
RefSeq | XP_002265171.1 | 0 | 44 | 561 | 99 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 44 | 561 | 65 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 244 | 561 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 250 | 561 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-24 | 261 | 545 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-24 | 261 | 545 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-24 | 261 | 545 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |