Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.149220.1 |
Family | CE8 |
Protein Properties | Length: 577 Molecular Weight: 63495.7 Isoelectric Point: 7.4679 |
Chromosome | Chromosome/Scaffold: 01110 Start: 79987 End: 82329 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 269 | 560 | 0 |
VTVSKDGKGQYTTIQDAVAAVPKKSKERFIIHVKEGIYEENVILDKSKWNVMMYGDGRTKTIVSGHLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAG PAKHQAVAFRSGSDLSVMSGCSFDGYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIRPRQPLPNQFNTITAQGKKDINQNSGISIQKCTFSA YNDSLNAPTYLGRPWKEFSTTVIMRSEIGGFLNPVGWKEWVSGQDPPSSIFYGEYQNSGPGSNVDKRVRWAGYKPSLTDSEAGRFTVGTFLN |
Full Sequence |
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Protein Sequence Length: 577 Download |
MDTVKSFKGY GKVDELEQQA FRQKTRRRLI IIFISLLLLI ALLVGAVVGI VVHKRNSSSS 60 STTTSPPPTE LTPPASLKTL CSVTQYPSSC QSSLQNSNTT DPVFLFKLSL RVATDSLSKL 120 SDYTSNFNST TGDPKVEAAI KICRSVFEDA IDTLNDTVSS MEVDRHSEKF LSPSRIEDLK 180 TWLSTTITDQ ETCLDALRDL NQTTVLQDLQ TAMANSTEFT SNSLAIVTKI LGLLADFNIP 240 IHRKLMGLPE WVSSGDRRLL QENNVTAHVT VSKDGKGQYT TIQDAVAAVP KKSKERFIIH 300 VKEGIYEENV ILDKSKWNVM MYGDGRTKTI VSGHLNFIDG TPTFSTATFA VAGKGFIGKD 360 MGFINTAGPA KHQAVAFRSG SDLSVMSGCS FDGYQDTLYA HSNRQFYRDC DITGTIDFIF 420 GNAAVVFQNC NIRPRQPLPN QFNTITAQGK KDINQNSGIS IQKCTFSAYN DSLNAPTYLG 480 RPWKEFSTTV IMRSEIGGFL NPVGWKEWVS GQDPPSSIFY GEYQNSGPGS NVDKRVRWAG 540 YKPSLTDSEA GRFTVGTFLN GEDWLPATNV NFDTSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 1.0e-160 | 77 | 568 | 518 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 8.0e-164 | 79 | 576 | 536 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 576 | 592 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 576 | 584 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 268 | 562 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175787.1 | 0 | 1 | 570 | 1 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 1 | 576 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 1 | 576 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 576 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 576 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 265 | 572 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 261 | 576 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-24 | 272 | 566 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-24 | 272 | 566 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-24 | 272 | 566 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |