| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.149990.1 |
| Family | CBM43 |
| Protein Properties | Length: 467 Molecular Weight: 52021 Isoelectric Point: 9.8867 |
| Chromosome | Chromosome/Scaffold: 01110 Start: 968097 End: 970083 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 374 | 457 | 5.5e-29 |
| WCVVGKGVNMSDVVGALSYACSQGNKTCEPIRKGGPCYEPDSLKRHASFAFSSYWAQFRKVGGTCYFNGLATQTIKDPSYGKCK | |||
| GH17 | 26 | 347 | 0 |
| VGINYGQLGNNLPPPSHSVNLIKSLNAQIVKIYDANPQILKALKNTDLRVSVMVPNELIINISSSQNLADQWVRTNILPFYPQTKIRYLLVGNEIISSTG NQTWFSLVPAMRRIKHSLKTYGIHKVKVGTPSAMDVLQSSFPPSNGTFRADIADRVMRPMLQFLNRTKSFFFLDVYPYFPWSSDSVNIKLDYALFESKNI TYSDPVSGLVYTNLFDQMVDSVIFAMKRLGFPDIRVFIAETGWPNGGDYDQIGASIHNAAVYNRNIVKRVTSKPPVGTPARPGRMLPTIIFSLYNENQKP GPGTERHFGLLYPKGKAVYEMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 467 Download |
| MPIPFLSLLF FLFFLSLSSA EISTLVGINY GQLGNNLPPP SHSVNLIKSL NAQIVKIYDA 60 NPQILKALKN TDLRVSVMVP NELIINISSS QNLADQWVRT NILPFYPQTK IRYLLVGNEI 120 ISSTGNQTWF SLVPAMRRIK HSLKTYGIHK VKVGTPSAMD VLQSSFPPSN GTFRADIADR 180 VMRPMLQFLN RTKSFFFLDV YPYFPWSSDS VNIKLDYALF ESKNITYSDP VSGLVYTNLF 240 DQMVDSVIFA MKRLGFPDIR VFIAETGWPN GGDYDQIGAS IHNAAVYNRN IVKRVTSKPP 300 VGTPARPGRM LPTIIFSLYN ENQKPGPGTE RHFGLLYPKG KAVYEMDLSG SRAETKFKPL 360 PEAERNEPYK GKIWCVVGKG VNMSDVVGAL SYACSQGNKT CEPIRKGGPC YEPDSLKRHA 420 SFAFSSYWAQ FRKVGGTCYF NGLATQTIKD PSYGKCKFPS VTLQAS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-18 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-35 | 374 | 458 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-111 | 26 | 347 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 15 | 463 | 14 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 6 | 463 | 14 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 15 | 463 | 14 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 6 | 463 | 3 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 463 | 2 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 26 | 348 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 348 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 26 | 349 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 26 | 349 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
