Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.153140.1 |
Family | CBM43 |
Protein Properties | Length: 441 Molecular Weight: 48136.6 Isoelectric Point: 7.551 |
Chromosome | Chromosome/Scaffold: 01124 Start: 359155 End: 360623 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 364 | 440 | 9e-29 |
CVAKDGADPGKLQNGLNWACGQGGANCSAIQPGQPCFLPDNILNHASYAYNDYYQKMQLNGGSCNFDGTATLTDTNP | |||
GH17 | 29 | 348 | 0 |
VGINIGTHVSSLPPASDVVSMLKQFEFTHVRLYDANAQLLKAFANSSTEVMVGVTNEEVLKIGKSPSAAAAWVNKNVVLYTPATNITAIAVGSEVLTSIP NAARVLLRAMKYLHKALVAANLNLQIKVSTPQSMDVILTSFPPSTATFNSSLNSTIYQLLQFLKNTNSYYMLNVYPYYGYIKGNGNFPLDYALFQPLSIN RQIVDPNTLLHYNNMFDAMLDATYHSIKALNFSDIPIVVTASGWPWSDGASEPSATKKNAEIYVNNLITRVLNGSGPPSEPTKPVNTYIYELFSEDQKPE PMSQKTWGVLSTKGSAIYRL |
Full Sequence |
---|
Protein Sequence Length: 441 Download |
MMHEKWPAVL FLLMSLMIFH VRGDSGAFVG INIGTHVSSL PPASDVVSML KQFEFTHVRL 60 YDANAQLLKA FANSSTEVMV GVTNEEVLKI GKSPSAAAAW VNKNVVLYTP ATNITAIAVG 120 SEVLTSIPNA ARVLLRAMKY LHKALVAANL NLQIKVSTPQ SMDVILTSFP PSTATFNSSL 180 NSTIYQLLQF LKNTNSYYML NVYPYYGYIK GNGNFPLDYA LFQPLSINRQ IVDPNTLLHY 240 NNMFDAMLDA TYHSIKALNF SDIPIVVTAS GWPWSDGASE PSATKKNAEI YVNNLITRVL 300 NGSGPPSEPT KPVNTYIYEL FSEDQKPEPM SQKTWGVLST KGSAIYRLSS LSSRVTGSSS 360 FVYCVAKDGA DPGKLQNGLN WACGQGGANC SAIQPGQPCF LPDNILNHAS YAYNDYYQKM 420 QLNGGSCNFD GTATLTDTNP X |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 255 | 339 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-20 | 363 | 434 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-34 | 363 | 440 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-81 | 29 | 348 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 26 | 440 | 23 | 439 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 30 | 440 | 27 | 438 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 26 | 440 | 23 | 439 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 30 | 440 | 27 | 438 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 40 | 440 | 1 | 401 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 349 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzj_A | 0 | 29 | 349 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzi_A | 0 | 29 | 349 | 3 | 313 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3f55_D | 0 | 29 | 338 | 2 | 303 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3f55_C | 0 | 29 | 338 | 2 | 303 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |