| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.155220.1 |
| Family | GH35 |
| Protein Properties | Length: 476 Molecular Weight: 53942.4 Isoelectric Point: 9.6614 |
| Chromosome | Chromosome/Scaffold: 01136 Start: 1665 End: 5633 |
| Description | beta-galactosidase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 30 | 364 | 0 |
| IINGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDIIETYVFWNGHEPSPDKYYFEERYDLVRFIKLVQQAGLYVHLRIGPYVCAEWNYGGFPLWLKF VPGIAFRTDNAPFKAAMQKFVIKIVDMMKWEKLFHTQGGPIILSQAKMTPISSFWWLSYKEEPASAYAKDTTTKDGLVEQVSVTWDTTDYLWYMTDIRID STEGFLKSGQWPLLTVNSAGHILHVFINGQLSGSVYGSLEDPRITFSKYVNLKQGVNKLSMLSVTVGLPNVGLHFDTWNAGVLGPVTLKGLNEGTRDMSK YKWSYKVGLRGEILNLYSVKGSNSVQWMKGSFQKQ | |||
| Full Sequence |
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| Protein Sequence Length: 476 Download |
| MPKTVLLFLC LLTWVCSTIG SVTYDHKAII INGRRRILIS GSIHYPRSTP QMWPDLIQKA 60 KDGGLDIIET YVFWNGHEPS PDKYYFEERY DLVRFIKLVQ QAGLYVHLRI GPYVCAEWNY 120 GGFPLWLKFV PGIAFRTDNA PFKAAMQKFV IKIVDMMKWE KLFHTQGGPI ILSQAKMTPI 180 SSFWWLSYKE EPASAYAKDT TTKDGLVEQV SVTWDTTDYL WYMTDIRIDS TEGFLKSGQW 240 PLLTVNSAGH ILHVFINGQL SGSVYGSLED PRITFSKYVN LKQGVNKLSM LSVTVGLPNV 300 GLHFDTWNAG VLGPVTLKGL NEGTRDMSKY KWSYKVGLRG EILNLYSVKG SNSVQWMKGS 360 FQKQPLTWYK TTFNTPAGNE PLALDMSSMS KGQIWVNGRS IGRYFPGYIA RGKCNKCSYT 420 GFFTEKKCLW NCGGPSQKWY HIPRDWLSPN GNLLIILEEI GGNPQGISLV KRTVF* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 7.0e-15 | 22 | 128 | 109 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-82 | 28 | 174 | 147 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 1.0e-99 | 6 | 174 | 169 | + beta-galactosidase; Provisional | ||
| PLN03059 | PLN03059 | 5.0e-161 | 173 | 474 | 305 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA06310.1 | 0 | 176 | 473 | 7 | 307 | beta-galactosidase [Cicer arietinum] |
| EMBL | CBI27912.1 | 0 | 4 | 174 | 5 | 175 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI27912.1 | 0 | 173 | 474 | 418 | 721 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282132.1 | 0 | 4 | 174 | 8 | 178 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282132.1 | 0 | 173 | 474 | 421 | 724 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 2e-27 | 21 | 176 | 10 | 163 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thd_C | 2e-27 | 21 | 176 | 10 | 163 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3thd_B | 2e-27 | 21 | 176 | 10 | 163 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 5 | 24 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 20 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EL453092 | 295 | 183 | 475 | 0 |
| JG507695 | 226 | 252 | 476 | 0 |
| FP025034 | 264 | 212 | 473 | 0 |
| EL371555 | 288 | 183 | 468 | 0 |
| EX262325 | 295 | 173 | 464 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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