Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.155270.1 |
Family | AA7 |
Protein Properties | Length: 504 Molecular Weight: 56676.5 Isoelectric Point: 6.7966 |
Chromosome | Chromosome/Scaffold: 01136 Start: 50501 End: 53286 |
Description | cytokinin oxidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA7 | 41 | 237 | 3.2e-26 |
HLVTSTPAAVLFPTSINDLVTLLKLANSRSVPFNVAAKGCGHSVHGQAMAENGVVVEMTSLNNNPSRISISGSADAGFFADVGGEQMWIDVLTATLKHGL APPSWTDYLYLTVGGTLSNAGISGQTFRYGPQICNVLELDVVTGKGDIVSCSAEKNNELFNSVLGGLGQFGIIVRARIPLFPAPNRVKWVRMLYNNF |
Full Sequence |
---|
Protein Sequence Length: 504 Download |
MVFNINRLKS FLTESFFSDH LPTHLRHDST ALSSAATDFG HLVTSTPAAV LFPTSINDLV 60 TLLKLANSRS VPFNVAAKGC GHSVHGQAMA ENGVVVEMTS LNNNPSRISI SGSADAGFFA 120 DVGGEQMWID VLTATLKHGL APPSWTDYLY LTVGGTLSNA GISGQTFRYG PQICNVLELD 180 VVTGKGDIVS CSAEKNNELF NSVLGGLGQF GIIVRARIPL FPAPNRVKWV RMLYNNFDEF 240 VKDQEKLILK NSNDDGGLNY LEGLLLMHDG PPDNWRSSFF PPSHHSTIIS LVNQHSIIYC 300 LEVAKYYDDR SRHTIDKELD NLLKGLNFLP GYKFEKDVSY VEFLNRVRGG ELSLRSQGLW 360 DVPHPWLNLF VPKSRIAEFN SGVFKDIILK RKIANGPILI YPMNRNKWDD KMSAVIPEEE 420 VFYTIGFLNS SGYDNWEAVE EQNKDILRFC DSVDMKIKQY LPHYNTKEDW EKHFGNKWKI 480 IQDRKNQFDP KMILSPGQKI FNS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK11230 | PRK11230 | 4.0e-9 | 45 | 242 | 211 | + glycolate oxidase subunit GlcD; Provisional | ||
pfam01565 | FAD_binding_4 | 6.0e-30 | 47 | 192 | 147 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
COG0277 | GlcD | 1.0e-34 | 24 | 498 | 485 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam09265 | Cytokin-bind | 3.0e-143 | 224 | 501 | 283 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 24 | 502 | 482 | + cytokinin dehydrogenase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACM79256.1 | 0 | 21 | 503 | 42 | 525 | cytokinin oxidase/dehydrogenase [Gossypium hirsutum] |
RefSeq | XP_002263646.1 | 0 | 1 | 503 | 22 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002279519.1 | 0 | 21 | 503 | 41 | 520 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308300.1 | 0 | 24 | 502 | 46 | 527 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002514119.1 | 0 | 24 | 502 | 46 | 529 | gulonolactone oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1d_A | 0 | 21 | 502 | 25 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3s1c_A | 0 | 21 | 502 | 25 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 21 | 502 | 25 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3c0p_A | 0 | 21 | 502 | 25 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3bw7_A | 0 | 21 | 502 | 25 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JG470904 | 245 | 1 | 245 | 0 |
CO121610 | 274 | 152 | 424 | 0 |
HO781924 | 479 | 31 | 501 | 0 |
JG555633 | 206 | 1 | 206 | 0 |
GD178209 | 198 | 233 | 427 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|