Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.158110.1 |
Family | CE8 |
Protein Properties | Length: 319 Molecular Weight: 35730.6 Isoelectric Point: 6.9837 |
Chromosome | Chromosome/Scaffold: 01142 Start: 244009 End: 247172 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 298 | 0 |
LTVAHDGCADFCTVQEAIDAVPFSNTCRTIIRVSPGIYKQPLYVPKTKNFITFAGLNPETTILTWDNTATKINHHQAARVIGTGTFGCGSTIVEGEDFLA ENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGRQYLKDCYIEGSVDFIFGNSTALLEHCHVHCKSKGFITAQSRKSSQETTGYVFLR CVITGSGETSYVHLGRPWGPFARVVFAYTHMDVCIKPAGWDNWGKAENERTACFYEYKCFGPGSCSMKRVCWARELLDEEADEFILHRFID |
Full Sequence |
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Protein Sequence Length: 319 Download |
MAAQPRVLTV AHDGCADFCT VQEAIDAVPF SNTCRTIIRV SPGIYKQPLY VPKTKNFITF 60 AGLNPETTIL TWDNTATKIN HHQAARVIGT GTFGCGSTIV EGEDFLAENI TFENSSPQGS 120 GQAVAIRVTA DRCAFYNCRF LGWQDTLYLH YGRQYLKDCY IEGSVDFIFG NSTALLEHCH 180 VHCKSKGFIT AQSRKSSQET TGYVFLRCVI TGSGETSYVH LGRPWGPFAR VVFAYTHMDV 240 CIKPAGWDNW GKAENERTAC FYEYKCFGPG SCSMKRVCWA RELLDEEADE FILHRFIDPD 300 VDRPWLCQRM ALRIPFSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-84 | 9 | 300 | 310 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 7.0e-94 | 3 | 298 | 304 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-95 | 7 | 298 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-109 | 6 | 298 | 301 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 6 | 318 | 313 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 7 | 318 | 5 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 3 | 318 | 2 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 318 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 6 | 318 | 4 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 6 | 318 | 4 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 5 | 279 | 7 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7.00649e-44 | 10 | 279 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-25 | 18 | 297 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-25 | 18 | 297 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-25 | 18 | 297 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR994392 | 303 | 6 | 308 | 0 |
DY292729 | 311 | 7 | 316 | 0 |
DY292725 | 303 | 7 | 309 | 0 |
ES794113 | 291 | 2 | 292 | 0 |
ES794113 | 69 | 251 | 319 | 0.005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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