Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.158110.2 |
Family | CE8 |
Protein Properties | Length: 293 Molecular Weight: 32858.3 Isoelectric Point: 6.6515 |
Chromosome | Chromosome/Scaffold: 01142 Start: 244009 End: 247172 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 116 | 1.6e-28 |
LTVAHDGCADFCTVQEAIDAVPFSNTCRTIIRVSPGIYKQPLYVPKTKNFITFAGLNPETTILTWDNTATKINHHQAARVIGTGTFGCGSTIVEGEDFLA ENITFENSS | |||
CE8 | 116 | 272 | 0 |
SPQDTLYLHYGRQYLKDCYIEGSVDFIFGNSTALLEHCHVHCKSKGFITAQSRKSSQETTGYVFLRCVITGSGETSYVHLGRPWGPFARVVFAYTHMDVC IKPAGWDNWGKAENERTACFYEYKCFGPGSCSMKRVCWARELLDEEADEFILHRFID |
Full Sequence |
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Protein Sequence Length: 293 Download |
MAAQPRVLTV AHDGCADFCT VQEAIDAVPF SNTCRTIIRV SPGIYKQPLY VPKTKNFITF 60 AGLNPETTIL TWDNTATKIN HHQAARVIGT GTFGCGSTIV EGEDFLAENI TFENSSPQDT 120 LYLHYGRQYL KDCYIEGSVD FIFGNSTALL EHCHVHCKSK GFITAQSRKS SQETTGYVFL 180 RCVITGSGET SYVHLGRPWG PFARVVFAYT HMDVCIKPAG WDNWGKAENE RTACFYEYKC 240 FGPGSCSMKR VCWARELLDE EADEFILHRF IDPDVDRPWL CQRMALRIPF SA* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 7.0e-66 | 7 | 280 | 315 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 5.0e-75 | 3 | 272 | 304 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-79 | 7 | 272 | 293 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-94 | 6 | 272 | 301 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 6 | 292 | 313 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 7 | 292 | 5 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 3 | 292 | 2 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 292 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 6 | 292 | 4 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 6 | 292 | 4 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99993e-41 | 5 | 253 | 7 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-32 | 10 | 253 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-16 | 118 | 271 | 153 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-16 | 118 | 271 | 153 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-16 | 118 | 271 | 153 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR994392 | 303 | 6 | 282 | 0 |
DY292729 | 311 | 7 | 290 | 0 |
DY292725 | 303 | 7 | 283 | 0 |
ES794113 | 291 | 2 | 266 | 0 |
ES794113 | 69 | 225 | 293 | 0.004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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