| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.164630.1 |
| Family | GH17 |
| Protein Properties | Length: 528 Molecular Weight: 59237.5 Isoelectric Point: 5.9901 |
| Chromosome | Chromosome/Scaffold: 01153 Start: 32838 End: 37833 |
| Description | ARM repeat superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 416 | 528 | 1.6e-28 |
| AIDSLKLTAVRLEDSDPNVIRAFAYTNITLLLTIPNSMVSPIAANRSAALQWLYIHVVPFYPRTIITTISVGNNFLEASPDLTTLLLPAIRNVYTALRNL GIRQISVSTTFSF | |||
| Full Sequence |
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| Protein Sequence Length: 528 Download |
| MSNSLQLLHE LCIQFSEPII KSLSNICDKP SEGSNVSVKP ILESLLPRKT SLRISPSEDD 60 IYSSIKDFTL ACALILSSHS STFDLLSWIT EDLALTAESA FRMLSKAYAS ASCDGFSKNI 120 EELGLDFSLI PEEKRLVVEI IPKVLPLLKD SIKESSIDKS DEVDEVSAAS ARVPVGFAIV 180 AAHQLRWFIT QGQGMLSFIH LAKNVNAAEL GWYEDVILDA CCSNVPSSDE IWPYVVEMSV 240 LLATSIHNMN PRSSWIERMV NEMLGHLERQ PRNKERCIAW LQHIEPLFNC MGLVLLAHTR 300 RIFPLFFKWM NAEDDETTLL VLQRIQTVVR LTWIRNTPYV ERLVDELAML YEKAATRSSG 360 DGIRKHVVDA LMLLQESKGQ QFKAAWSKHK DLQNLVSLST SLTRLNITDC VDLPKAIDSL 420 KLTAVRLEDS DPNVIRAFAY TNITLLLTIP NSMVSPIAAN RSAALQWLYI HVVPFYPRTI 480 ITTISVGNNF LEASPDLTTL LLPAIRNVYT ALRNLGIRQI SVSTTFSF |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-17 | 412 | 528 | 125 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB95276.2 | 0 | 8 | 399 | 8 | 416 | expressed protein [Arabidopsis thaliana] |
| EMBL | CAN71831.1 | 0 | 1 | 375 | 1 | 387 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276243.1 | 0 | 1 | 406 | 1 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312138.1 | 0 | 14 | 399 | 1 | 412 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530409.1 | 0 | 1 | 403 | 1 | 435 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0.000000000001 | 419 | 525 | 24 | 130 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0.0000007 | 408 | 528 | 16 | 130 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0.0000007 | 408 | 528 | 16 | 130 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0.0000008 | 422 | 525 | 28 | 134 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0.0000008 | 422 | 525 | 28 | 134 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HE645922 | 260 | 125 | 355 | 0 |
| EC966829 | 320 | 4 | 287 | 0 |
| DY389380 | 257 | 164 | 391 | 0 |
| BQ792734 | 203 | 204 | 406 | 0 |
| FS351084 | 252 | 168 | 390 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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