Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.167050.1 |
Family | CE8 |
Protein Properties | Length: 568 Molecular Weight: 62479.3 Isoelectric Point: 9.6046 |
Chromosome | Chromosome/Scaffold: 01154 Start: 424299 End: 426290 |
Description | root hair specific 12 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 261 | 552 | 0 |
DIVVAKDRSGKYKTITEALGAVPDKSKKRTVIYVKKGIYKENVEVVKNKWNVVMVGDGMTATIVSGNLNVVDGTPTFSTATFAAKGKGFIAIDMGFINTA GPSKHQAVALMSTSDQSIFYRCEMNAYQDTLYAHSNRQFYRECKVYGTVDFIFGNSAVVLQNCTIAPRLPLLGQKNTITAQGRFDPNQNTGISIQGSLIQ PFNDLKTTETYLGRPWKNYSTTVFMQSNLGRLIHPTGWLPWIGTSAPDTIFYAEFQNYGPGSSTSKRVKWKGVKNIDTKTAKKFTVSSFIDG |
Full Sequence |
---|
Protein Sequence Length: 568 Download |
MSFLRPYGKV DETDQLRLDA RRRTRRRIVV IVLSSVVLVA VVVAVVFGTR NASNNNDDSN 60 NQNGSLSTSI KAVCDVTLYP DTCQKAFGPI ANSSHLDPGQ ISKLSVQLAL GELSKVADYI 120 FDHAITKTAD NKTILALKNC HELLDLALDH LNISLSSSDI TLLKAVDDLK TWITSAATYQ 180 QTCIDDLAEV DPALADLVAN FLKNSTELTS NGLAIVSFFS KLTDSLSLRR LMSYENHQSN 240 GDWARPILRK LAQSDIRKHA DIVVAKDRSG KYKTITEALG AVPDKSKKRT VIYVKKGIYK 300 ENVEVVKNKW NVVMVGDGMT ATIVSGNLNV VDGTPTFSTA TFAAKGKGFI AIDMGFINTA 360 GPSKHQAVAL MSTSDQSIFY RCEMNAYQDT LYAHSNRQFY RECKVYGTVD FIFGNSAVVL 420 QNCTIAPRLP LLGQKNTITA QGRFDPNQNT GISIQGSLIQ PFNDLKTTET YLGRPWKNYS 480 TTVFMQSNLG RLIHPTGWLP WIGTSAPDTI FYAEFQNYGP GSSTSKRVKW KGVKNIDTKT 540 AKKFTVSSFI DGKDWISKAQ VPFTATL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 9.0e-146 | 70 | 567 | 514 | + pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 1.0e-146 | 64 | 562 | 524 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-174 | 261 | 552 | 297 | + Pectinesterase. | ||
PLN02468 | PLN02468 | 0 | 4 | 567 | 568 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 65 | 567 | 522 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29155.1 | 0 | 1 | 567 | 1 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 567 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311918.1 | 0 | 1 | 567 | 1 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316458.1 | 0 | 1 | 567 | 1 | 569 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 567 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 261 | 567 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 260 | 567 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 6e-17 | 263 | 526 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-17 | 263 | 526 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-17 | 263 | 526 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |