| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.182080.1 |
| Family | GH2 |
| Protein Properties | Length: 977 Molecular Weight: 111025 Isoelectric Point: 6.0924 |
| Chromosome | Chromosome/Scaffold: 01251 Start: 206046 End: 213694 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 17 | 753 | 0 |
| ARSTEVNLTGTQLTTTHPPSITPSSPWMEASVPGTVLGTLVKNKVVPDPFYGLANETIIDIADSGREYYTFWFFTTFQCKLQSESQHLDLNFRAINYSAE VYINGHKKVLPKGMFRRHSLDVSEVLHTDGKNLLAVLVHPPDHPGRIPDKGGQGGDHEIGKDVAAQYVEGWDWMTPIRDRNTGIWDEVSISRTGPVKIID PHLVSTFFDDYKRVYLHATIEIQNRSSWVSDCSVKIQVTAELEGNICLVEHLQAQKVSVPTGSIIQYTFPQLYFYKPNLWWPNGMGKQYLYNVVISIDVD GFGESDSWSHDFGFRKIESDIDPATGGRLFKVNGQRIFIRGGNWILSDGLLRLSEKRYHTDIKFHADMNFNMIRCWGGGLAERPEFYHYCDIYGLLVWQE FWITGDVDGRGDPKSNPDGPLDHDLFLLCARDTVKLLRNHPSLALWVGGNEQVPPPDINAALKSDLKLHPHFQPSENNQLMSVLSLTAEDPSEYLDGTRI YVQGSMWDGFANGKGDFSDGPYEIQYPENFFKDNFYNYGFNPEVGSVGMPVAATIRATMPPEGWRIPLFKKLPSGYIEEVPNPIWDYHKYIPYSKPCHVQ SQIELYGSPKDLDDFCLKAQLANYIQYRALIEGWNSRMWKKYTGFLIWKTQNPWTGLRGQFYDHLLDQTAGFFGCRCAAEPIHVQLNLCTYFIEVVNTTS NEISGVAIEASVWDLEGMCPYFKVFEKLSLPPKQTSS | |||
| Full Sequence |
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| Protein Sequence Length: 977 Download |
| MAEIGNKVKL NAGWLAARST EVNLTGTQLT TTHPPSITPS SPWMEASVPG TVLGTLVKNK 60 VVPDPFYGLA NETIIDIADS GREYYTFWFF TTFQCKLQSE SQHLDLNFRA INYSAEVYIN 120 GHKKVLPKGM FRRHSLDVSE VLHTDGKNLL AVLVHPPDHP GRIPDKGGQG GDHEIGKDVA 180 AQYVEGWDWM TPIRDRNTGI WDEVSISRTG PVKIIDPHLV STFFDDYKRV YLHATIEIQN 240 RSSWVSDCSV KIQVTAELEG NICLVEHLQA QKVSVPTGSI IQYTFPQLYF YKPNLWWPNG 300 MGKQYLYNVV ISIDVDGFGE SDSWSHDFGF RKIESDIDPA TGGRLFKVNG QRIFIRGGNW 360 ILSDGLLRLS EKRYHTDIKF HADMNFNMIR CWGGGLAERP EFYHYCDIYG LLVWQEFWIT 420 GDVDGRGDPK SNPDGPLDHD LFLLCARDTV KLLRNHPSLA LWVGGNEQVP PPDINAALKS 480 DLKLHPHFQP SENNQLMSVL SLTAEDPSEY LDGTRIYVQG SMWDGFANGK GDFSDGPYEI 540 QYPENFFKDN FYNYGFNPEV GSVGMPVAAT IRATMPPEGW RIPLFKKLPS GYIEEVPNPI 600 WDYHKYIPYS KPCHVQSQIE LYGSPKDLDD FCLKAQLANY IQYRALIEGW NSRMWKKYTG 660 FLIWKTQNPW TGLRGQFYDH LLDQTAGFFG CRCAAEPIHV QLNLCTYFIE VVNTTSNEIS 720 GVAIEASVWD LEGMCPYFKV FEKLSLPPKQ TSSIAEMEYP TYKNSKPVYF LLLKLYKVSN 780 DGIISRNFYW LHQFGGDYKK LEPYRKINIP IQVTSKVNIK GSSYEVRMNV QNNSKNAESS 840 RLTYKNNFIN RQDLGDLDSN SLLLENKEQT NEKCSTSFFS KIWRRGSIEN NSSRLVETNG 900 NDVGVAFFLH FEVHDSKAEE NEEGDTRILP VHYSDNYFSL VPGEAMSINL SFEAPPGVTP 960 KITLHGWNLS QSFTVC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 6.0e-7 | 86 | 165 | 80 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK09525 | lacZ | 2.0e-9 | 137 | 467 | 367 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 5.0e-12 | 212 | 331 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 4.0e-12 | 116 | 467 | 364 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 8.0e-38 | 45 | 467 | 433 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO27794.1 | 0 | 1 | 968 | 1 | 967 | glycosyl hydrolase [Gossypium hirsutum] |
| EMBL | CAN82620.1 | 0 | 1 | 975 | 1 | 972 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 975 | 1 | 972 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 975 | 1 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 968 | 1 | 965 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 39 | 791 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 39 | 791 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 39 | 791 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 384 | 376 | 754 | 0 |
| GO871600 | 334 | 303 | 634 | 0 |
| ES832790 | 352 | 498 | 849 | 0 |
| GO848159 | 295 | 168 | 462 | 0 |
| GO848159 | 20 | 463 | 482 | 4.3 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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