| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.182080.2 |
| Family | GH2 |
| Protein Properties | Length: 976 Molecular Weight: 110897 Isoelectric Point: 6.0924 |
| Chromosome | Chromosome/Scaffold: 01251 Start: 206046 End: 213694 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 17 | 752 | 0 |
| ARSTEVNLTGTQLTTTHPPSITPSSPWMEASVPGTVLGTLVKNKVVPDPFYGLANETIIDIADSGREYYTFWFFTTFQCKLSESQHLDLNFRAINYSAEV YINGHKKVLPKGMFRRHSLDVSEVLHTDGKNLLAVLVHPPDHPGRIPDKGGQGGDHEIGKDVAAQYVEGWDWMTPIRDRNTGIWDEVSISRTGPVKIIDP HLVSTFFDDYKRVYLHATIEIQNRSSWVSDCSVKIQVTAELEGNICLVEHLQAQKVSVPTGSIIQYTFPQLYFYKPNLWWPNGMGKQYLYNVVISIDVDG FGESDSWSHDFGFRKIESDIDPATGGRLFKVNGQRIFIRGGNWILSDGLLRLSEKRYHTDIKFHADMNFNMIRCWGGGLAERPEFYHYCDIYGLLVWQEF WITGDVDGRGDPKSNPDGPLDHDLFLLCARDTVKLLRNHPSLALWVGGNEQVPPPDINAALKSDLKLHPHFQPSENNQLMSVLSLTAEDPSEYLDGTRIY VQGSMWDGFANGKGDFSDGPYEIQYPENFFKDNFYNYGFNPEVGSVGMPVAATIRATMPPEGWRIPLFKKLPSGYIEEVPNPIWDYHKYIPYSKPCHVQS QIELYGSPKDLDDFCLKAQLANYIQYRALIEGWNSRMWKKYTGFLIWKTQNPWTGLRGQFYDHLLDQTAGFFGCRCAAEPIHVQLNLCTYFIEVVNTTSN EISGVAIEASVWDLEGMCPYFKVFEKLSLPPKQTSS | |||
| Full Sequence |
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| Protein Sequence Length: 976 Download |
| MAEIGNKVKL NAGWLAARST EVNLTGTQLT TTHPPSITPS SPWMEASVPG TVLGTLVKNK 60 VVPDPFYGLA NETIIDIADS GREYYTFWFF TTFQCKLSES QHLDLNFRAI NYSAEVYING 120 HKKVLPKGMF RRHSLDVSEV LHTDGKNLLA VLVHPPDHPG RIPDKGGQGG DHEIGKDVAA 180 QYVEGWDWMT PIRDRNTGIW DEVSISRTGP VKIIDPHLVS TFFDDYKRVY LHATIEIQNR 240 SSWVSDCSVK IQVTAELEGN ICLVEHLQAQ KVSVPTGSII QYTFPQLYFY KPNLWWPNGM 300 GKQYLYNVVI SIDVDGFGES DSWSHDFGFR KIESDIDPAT GGRLFKVNGQ RIFIRGGNWI 360 LSDGLLRLSE KRYHTDIKFH ADMNFNMIRC WGGGLAERPE FYHYCDIYGL LVWQEFWITG 420 DVDGRGDPKS NPDGPLDHDL FLLCARDTVK LLRNHPSLAL WVGGNEQVPP PDINAALKSD 480 LKLHPHFQPS ENNQLMSVLS LTAEDPSEYL DGTRIYVQGS MWDGFANGKG DFSDGPYEIQ 540 YPENFFKDNF YNYGFNPEVG SVGMPVAATI RATMPPEGWR IPLFKKLPSG YIEEVPNPIW 600 DYHKYIPYSK PCHVQSQIEL YGSPKDLDDF CLKAQLANYI QYRALIEGWN SRMWKKYTGF 660 LIWKTQNPWT GLRGQFYDHL LDQTAGFFGC RCAAEPIHVQ LNLCTYFIEV VNTTSNEISG 720 VAIEASVWDL EGMCPYFKVF EKLSLPPKQT SSIAEMEYPT YKNSKPVYFL LLKLYKVSND 780 GIISRNFYWL HQFGGDYKKL EPYRKINIPI QVTSKVNIKG SSYEVRMNVQ NNSKNAESSR 840 LTYKNNFINR QDLGDLDSNS LLLENKEQTN EKCSTSFFSK IWRRGSIENN SSRLVETNGN 900 DVGVAFFLHF EVHDSKAEEN EEGDTRILPV HYSDNYFSLV PGEAMSINLS FEAPPGVTPK 960 ITLHGWNLSQ SFTVC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 2.0e-6 | 87 | 466 | 415 | + beta-D-glucuronidase; Provisional | ||
| PRK09525 | lacZ | 2.0e-9 | 136 | 466 | 367 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 5.0e-12 | 211 | 330 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 4.0e-12 | 115 | 466 | 364 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 2.0e-37 | 45 | 466 | 433 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO27794.1 | 0 | 1 | 967 | 1 | 967 | glycosyl hydrolase [Gossypium hirsutum] |
| EMBL | CAN82620.1 | 0 | 1 | 974 | 1 | 972 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 974 | 1 | 972 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 974 | 1 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 967 | 1 | 965 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 39 | 790 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 39 | 790 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 39 | 790 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 384 | 375 | 753 | 0 |
| GO871600 | 334 | 302 | 633 | 0 |
| ES832790 | 352 | 497 | 848 | 0 |
| GO848159 | 295 | 167 | 461 | 0 |
| GO848159 | 20 | 462 | 481 | 4.3 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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