Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.185070.1 |
Family | CBM43 |
Protein Properties | Length: 506 Molecular Weight: 55305.5 Isoelectric Point: 6.7157 |
Chromosome | Chromosome/Scaffold: 01274 Start: 660471 End: 662839 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 388 | 467 | 2.8e-32 |
WCVASGEAGKEKLQSGLDYACGEGGADCRPIQVGATCYNPNTLEAHASYAFNSYYQKNSRKVGTCYFGGAAYVVTQPPSK | |||
GH17 | 26 | 345 | 0 |
IGVNYGRIGNDLPSAVKVVKLLKSHGLQRVKVYDTDPAVLKALSGSGIKVTVDLPNELLFAAAKRLTFAYTWVEKNVAAYYPSTEIEAIAVGNEVFVDPH NTTSFLVPAMKNIHQALVKYNLHSNIKVSSPIALSALQNSYPSSAGSFRPELVETVFRPMLEFLRQTGSYLMVNAYPFFAYESNTDVISLDYALFRDNPG VVDAGSGYRYFNLFDAQIDAVFAAMSALKYDDIKMVVTETGWPSKGDENEIGASVENAAAYNGNLVRRILSGGGTPLRPKADLTVYLFALFNENKKNGPT SERNYGLFYPNEEKVYDIPF |
Full Sequence |
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Protein Sequence Length: 506 Download |
MEQLKSLWFF YFFLLFLSPF AESGSIGVNY GRIGNDLPSA VKVVKLLKSH GLQRVKVYDT 60 DPAVLKALSG SGIKVTVDLP NELLFAAAKR LTFAYTWVEK NVAAYYPSTE IEAIAVGNEV 120 FVDPHNTTSF LVPAMKNIHQ ALVKYNLHSN IKVSSPIALS ALQNSYPSSA GSFRPELVET 180 VFRPMLEFLR QTGSYLMVNA YPFFAYESNT DVISLDYALF RDNPGVVDAG SGYRYFNLFD 240 AQIDAVFAAM SALKYDDIKM VVTETGWPSK GDENEIGASV ENAAAYNGNL VRRILSGGGT 300 PLRPKADLTV YLFALFNENK KNGPTSERNY GLFYPNEEKV YDIPFTTEGL KDFEDKPSPK 360 PVSGGNAPTA PPASGDGGVS KSQTGNTWCV ASGEAGKEKL QSGLDYACGE GGADCRPIQV 420 GATCYNPNTL EAHASYAFNS YYQKNSRKVG TCYFGGAAYV VTQPPSKFSL TFSLSLFLIH 480 FYHRRTLEKM NPTCATPDSH SSFTL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-6 | 18 | 336 | 333 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-23 | 387 | 459 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-36 | 387 | 465 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-108 | 26 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD26909.1 | 0 | 22 | 472 | 21 | 468 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | XP_002274828.1 | 0 | 13 | 465 | 9 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 8 | 465 | 4 | 459 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 20 | 465 | 18 | 459 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 21 | 468 | 19 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |