Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.193950.2 |
Family | CBM43 |
Protein Properties | Length: 167 Molecular Weight: 18836.4 Isoelectric Point: 8.1957 |
Chromosome | Chromosome/Scaffold: 01337 Start: 86736 End: 91411 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 30 | 107 | 2.1e-30 |
WCVARSDATYESLQAALDYACATGAECTPIMLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPS |
Full Sequence |
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Protein Sequence Length: 167 Download |
MATFLLSHYS FFFFFFFFLF GTSTVDGAYW CVARSDATYE SLQAALDYAC ATGAECTPIM 60 LNGLCFLPNT IQAHASYAFN SFFQRKAMAP GSCDFAGSAT IAQSDPSPSP LFTFLLCSSS 120 WLWILCLSIF SKLCRRSNYT EPSSKRKPHN NSSWYSYTKL QQWRYQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-18 | 30 | 100 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-31 | 30 | 107 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193096.5 | 7e-37 | 28 | 107 | 59 | 138 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 9e-39 | 26 | 107 | 46 | 127 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300169.1 | 2e-38 | 30 | 107 | 2 | 79 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323780.1 | 1e-38 | 30 | 107 | 1 | 78 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518089.1 | 4.99983e-42 | 11 | 107 | 8 | 104 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 30 | 107 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |