| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.196370.1 |
| Family | AA5 |
| Protein Properties | Length: 569 Molecular Weight: 64111.7 Isoelectric Point: 10.7467 |
| Chromosome | Chromosome/Scaffold: 01357 Start: 76571 End: 78277 |
| Description | glyoxal oxidase-related protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 38 | 565 | 0 |
| QTAGRWKLLMNNTGVIAMHMALTHYDTVVIFDQTSAGPSGYRLRRRFGGKICTTSPADMVDPNCYAHSVEYDISKNQVRALQISSDTWCSSGSILSNGTL LQTGGYGSGARRIRNFRPCKDHHCNWSESNKLLSNARWYATTIVLPEHDRLFVVGGKRAFNYEFVPKMGKEKSYDLPFLHRTFNSREGGNNLYPFVHLSS DGNLFIFANRDSILFNYRRNKVVKTFPRIPGGGGRNYPATGSSVMLPLDHRNKFQVVEVMVCGGSATGAYRAARRGQFMKGLRSCGRMVITGNRHKWNME NMPEPRLLHDMLILPTGNILIINGAKTGCAGWGNARNASLRPYLYKPKNQLNRRFSILRSTKIARMYHSSAIVLTDGRILIAGGNTNKNYTYINVPYPTE LRLQAYHPHYTESKHNNQRPRNVTIHYARGDYGIKYGGEFRVRFKLGRRRKEDAIEFNIYSPPFATHSFSMNQRLVKLRRKIMAREGNGEWMSAIVEGPP SANVAPAGYYLFTVVYGGIPSVSRWIRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 569 Download |
| MANHKHFSAV LNVLKATIVL LLQCTKIRSV VGVSLATQTA GRWKLLMNNT GVIAMHMALT 60 HYDTVVIFDQ TSAGPSGYRL RRRFGGKICT TSPADMVDPN CYAHSVEYDI SKNQVRALQI 120 SSDTWCSSGS ILSNGTLLQT GGYGSGARRI RNFRPCKDHH CNWSESNKLL SNARWYATTI 180 VLPEHDRLFV VGGKRAFNYE FVPKMGKEKS YDLPFLHRTF NSREGGNNLY PFVHLSSDGN 240 LFIFANRDSI LFNYRRNKVV KTFPRIPGGG GRNYPATGSS VMLPLDHRNK FQVVEVMVCG 300 GSATGAYRAA RRGQFMKGLR SCGRMVITGN RHKWNMENMP EPRLLHDMLI LPTGNILIIN 360 GAKTGCAGWG NARNASLRPY LYKPKNQLNR RFSILRSTKI ARMYHSSAIV LTDGRILIAG 420 GNTNKNYTYI NVPYPTELRL QAYHPHYTES KHNNQRPRNV TIHYARGDYG IKYGGEFRVR 480 FKLGRRRKED AIEFNIYSPP FATHSFSMNQ RLVKLRRKIM AREGNGEWMS AIVEGPPSAN 540 VAPAGYYLFT VVYGGIPSVS RWIRIIHS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 3.0e-19 | 471 | 565 | 96 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 3.0e-24 | 453 | 565 | 114 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 6.0e-99 | 55 | 301 | 251 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF43943.1 | 0 | 4 | 565 | 3 | 564 | AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb |
| RefSeq | XP_001771865.1 | 0 | 57 | 565 | 1 | 491 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002276473.1 | 0 | 41 | 568 | 45 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280559.1 | 0 | 35 | 565 | 32 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002510488.1 | 0 | 23 | 565 | 21 | 546 | Galactose oxidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1k3i_A | 0.000001 | 343 | 567 | 456 | 656 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2vz3_A | 0.000001 | 343 | 567 | 439 | 639 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2vz1_A | 0.000001 | 343 | 567 | 439 | 639 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2jkx_A | 0.000001 | 343 | 567 | 439 | 639 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2eie_A | 0.000001 | 343 | 567 | 439 | 639 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
