y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.197180.1 |
Family | GH47 |
Protein Properties | Length: 576 Molecular Weight: 65666.5 Isoelectric Point: 6.5082 |
Chromosome | Chromosome/Scaffold: 01357 Start: 665807 End: 671706 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 44 | 478 | 0 |
MFYHAYDNYMTYAFPNDELKPLTKTFTNSLSELGNLKLEHLPQNYTGSALTLIESLSSLVILGNNTEFQKAVLWLSENLHFDVDARINLFECNIRVLGGL VSAHVLATDSTNRLARQSYKNQLLVLAEDLGNRFLPAFNTPTGLPYAWINLKHGVMEDETTETSTSGCGSLILEMGALSRLTGDPRFEHAALRALRKLWS MRSSLNLLGTTLDVETGEWIEFSSGIGAGVDSFYEYLLKAHVLFGKEEFWRMFHAAYLAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLVG DIPAANSSHREFFYVWEKYGVLPERYLLDRQMLHPTEKYYPLRPELAESTFYLYQATKDPWYFEVGESIIKSLISHTKVEGGFASVRDVTTMQLEDHQHS FFLSETCKYLYLLFDDSFLVDQNYIFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 576 Download |
MLSRRSFAWI LLLFIIFFTL FNPSSSSSYL TSKRMRMREK ARRMFYHAYD NYMTYAFPND 60 ELKPLTKTFT NSLSELGNLK LEHLPQNYTG SALTLIESLS SLVILGNNTE FQKAVLWLSE 120 NLHFDVDARI NLFECNIRVL GGLVSAHVLA TDSTNRLARQ SYKNQLLVLA EDLGNRFLPA 180 FNTPTGLPYA WINLKHGVME DETTETSTSG CGSLILEMGA LSRLTGDPRF EHAALRALRK 240 LWSMRSSLNL LGTTLDVETG EWIEFSSGIG AGVDSFYEYL LKAHVLFGKE EFWRMFHAAY 300 LAVQKYFRHG PWYHEADMRT GRATYWQLTS LQAFWPGLQV LVGDIPAANS SHREFFYVWE 360 KYGVLPERYL LDRQMLHPTE KYYPLRPELA ESTFYLYQAT KDPWYFEVGE SIIKSLISHT 420 KVEGGFASVR DVTTMQLEDH QHSFFLSETC KYLYLLFDDS FLVDQNYIFT TEGHPLPVLS 480 SWHERLPEVY GLTNGTSIKG ENSSRRLSAM SLQVCPATSL NTAGDGGQQI ESACHILDAR 540 ADHKCFSDEE CGVDSTTCRR RSCSSSGYCG QWLHL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 4.0e-78 | 45 | 478 | 471 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-150 | 45 | 478 | 471 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 10 | 572 | 10 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 1 | 575 | 1 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 37 | 573 | 1 | 528 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 1 | 573 | 1 | 565 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 1 | 573 | 1 | 573 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 38 | 479 | 21 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1fmi_A | 0 | 44 | 478 | 17 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo3_A | 0 | 44 | 478 | 17 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1fo2_A | 0 | 44 | 478 | 17 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1x9d_A | 0 | 44 | 478 | 95 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |