Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.201150.1 |
Family | CE8 |
Protein Properties | Length: 378 Molecular Weight: 42194.2 Isoelectric Point: 9.675 |
Chromosome | Chromosome/Scaffold: 01374 Start: 94445 End: 97542 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 360 | 0 |
KNTKAGGFRSLQKAVNSLPIINRCRVRIHVAAGIYREKVEIPATMSYIWVEGEGAEKTIIEWGDTADHMGENGRPMGTFASATFAVNSPFFIATNITFKN KARLPPSGALGKQAVAFRISGDAAAFISCRFIGAQDTLYDHMGRHYFKDCYIEGSVDFVFGDGLSIYDSCHLHAITNSYGALTAQKRNSMLEETGFSFLH CKVSGSGALYLGRAWGSFSRVVFAYTFMDKIITPTGWYNWGDKNRELTVFYGQYRCSGPGADYGGRVPWSRELTQSEANPFLSLDFIN |
Full Sequence |
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Protein Sequence Length: 378 Download |
MSRPLIFNLF FLLIAIILPA AAQNWTAGGG RGMRSTVQDE YFKWIRHMGS FKHSLFQNTK 60 NKFKPCLTLK VSKNTKAGGF RSLQKAVNSL PIINRCRVRI HVAAGIYREK VEIPATMSYI 120 WVEGEGAEKT IIEWGDTADH MGENGRPMGT FASATFAVNS PFFIATNITF KNKARLPPSG 180 ALGKQAVAFR ISGDAAAFIS CRFIGAQDTL YDHMGRHYFK DCYIEGSVDF VFGDGLSIYD 240 SCHLHAITNS YGALTAQKRN SMLEETGFSF LHCKVSGSGA LYLGRAWGSF SRVVFAYTFM 300 DKIITPTGWY NWGDKNRELT VFYGQYRCSG PGADYGGRVP WSRELTQSEA NPFLSLDFIN 360 ANQWLPNYHT HLSLKPH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-104 | 63 | 365 | 303 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-105 | 58 | 365 | 312 | + pectinesterase | ||
PLN02634 | PLN02634 | 5.0e-107 | 77 | 365 | 290 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-110 | 68 | 368 | 306 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 0 | 38 | 367 | 330 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17409.1 | 0 | 38 | 367 | 34 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266952.1 | 0 | 38 | 367 | 32 | 361 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310842.1 | 0 | 40 | 367 | 12 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330522.1 | 0 | 38 | 365 | 52 | 379 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531506.1 | 0 | 21 | 365 | 16 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 77 | 365 | 16 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-40 | 78 | 365 | 13 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 4e-26 | 71 | 333 | 35 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 7e-19 | 71 | 366 | 8 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 7e-19 | 71 | 366 | 8 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |