Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.202120.1 |
Family | CE8 |
Protein Properties | Length: 605 Molecular Weight: 65770.5 Isoelectric Point: 8.6548 |
Chromosome | Chromosome/Scaffold: 01376 Start: 268138 End: 272729 |
Description | pectin methylesterase PCR fragment F |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 289 | 585 | 0 |
DIVVAKDGSGKFKTVAEAIEAAPSSSGRRIIIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVYDKVTTFRTATFAGSGTNIILRDMTFENT AGPSKHQAVALRLSADHAVVYHCNIIGYQDTLYVHSNRQFFRECDIYGTIDFIFGNAVVVFQSCNIYARKPMAGQKNTITAQDRKDPNQNTGISIHACKI VATGDLEASKGSFPTFLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVGQFIY |
Full Sequence |
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Protein Sequence Length: 605 Download |
MNNNNSYNKL HTSHSANTTP AASFRLSGND PPPPSSSLRR RSRILIISFM SVLLIAASVV 60 SAAILVRSHM TSSQPHFPHN KPSQAISRAC SHTLYPSLCL SSLLSFPGAQ SADVHDLVHI 120 SLNLTLQHLT KALYSTSQIP VLQISKDPLA HSAYEDCMEL LNDAIDAFSL SLFSKDASNH 180 DIMTWLSAAL TYHDTCTAGF QDVADLGVKD EVEAKLSDLS EMISNSLAIF SGFGGGDLPV 240 ENRKRRRLME SSTTSWAAEN GGDHEGFPAW LSGKDRRLLA APLSTIQADI VVAKDGSGKF 300 KTVAEAIEAA PSSSGRRIII YIKAGKYEEE NLKVGRKKTN LMFVGDGKGI TVISGGKSVY 360 DKVTTFRTAT FAGSGTNIIL RDMTFENTAG PSKHQAVALR LSADHAVVYH CNIIGYQDTL 420 YVHSNRQFFR ECDIYGTIDF IFGNAVVVFQ SCNIYARKPM AGQKNTITAQ DRKDPNQNTG 480 ISIHACKIVA TGDLEASKGS FPTFLGRPWK LYSRVVYMVS SMGDHIHPRG WLEWQGSFAL 540 DTLYYGEYMN SGPGAAVGQR VKWPGYRVIT STVEASKFTV GQFIYGSSWL PSTGVSFSAG 600 LSTN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 6.0e-167 | 78 | 601 | 546 | + pectinesterase | ||
PLN02468 | PLN02468 | 9.0e-169 | 67 | 601 | 541 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 73 | 602 | 538 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 289 | 587 | 299 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 77 | 601 | 531 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 79 | 602 | 82 | 616 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_200149.1 | 0 | 81 | 602 | 70 | 586 | PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 79 | 602 | 69 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 79 | 601 | 30 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 72 | 602 | 70 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 284 | 601 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 286 | 601 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-20 | 291 | 592 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 291 | 592 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-20 | 291 | 592 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |