Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.202330.1 |
Family | CBM43 |
Protein Properties | Length: 494 Molecular Weight: 54061.6 Isoelectric Point: 5.5785 |
Chromosome | Chromosome/Scaffold: 01376 Start: 389735 End: 391560 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 409 | 491 | 4.4e-30 |
WCLPKSEASEEGLQRNIDYVCGLGLDCGPIKENGACFAPNTVRAHAAYVMNAYFQATEGNDFDCDFDQTGTLTTVDPSYGKCK | |||
GH17 | 62 | 376 | 0 |
IGVNYGTVADNLPPPSKVAAFLLDNTIIDRVRLFDADPDILRAFAHTGISVSITIPNDQIPRLVKPNFAEEWIKFNIQPYIPATNIIRVLVGNEVLSTAN KLLIANLVPAMQSLHTALIEASLDRRIQISTPHSLGILSNSTPPSTARFRQGYDTHVIKPMLSFLRETNSPLMVNPYPFFACTADNLDYALFRPNPGVFD SDLGILYTNMLDAQLDAVYSAMKSLGFEDLDIVIAETGWPSKGDPTQVGVGPKEAAYYNGNLMRHVVSGKGTPLMPNRTFETYIFALFNENLKPGPIGER NFGLFEPDLSPVYEI |
Full Sequence |
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Protein Sequence Length: 494 Download |
MPHPNSLSSS KSIFITSIHP MASSPFTLSH HLLLPYFSTL PTFLLLILPT LFQIQGVNGG 60 SIGVNYGTVA DNLPPPSKVA AFLLDNTIID RVRLFDADPD ILRAFAHTGI SVSITIPNDQ 120 IPRLVKPNFA EEWIKFNIQP YIPATNIIRV LVGNEVLSTA NKLLIANLVP AMQSLHTALI 180 EASLDRRIQI STPHSLGILS NSTPPSTARF RQGYDTHVIK PMLSFLRETN SPLMVNPYPF 240 FACTADNLDY ALFRPNPGVF DSDLGILYTN MLDAQLDAVY SAMKSLGFED LDIVIAETGW 300 PSKGDPTQVG VGPKEAAYYN GNLMRHVVSG KGTPLMPNRT FETYIFALFN ENLKPGPIGE 360 RNFGLFEPDL SPVYEIGILR PTAQSATPRA HQGQVEGPSP STVSESKRWC LPKSEASEEG 420 LQRNIDYVCG LGLDCGPIKE NGACFAPNTV RAHAAYVMNA YFQATEGNDF DCDFDQTGTL 480 TTVDPSYGKC KYW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-19 | 408 | 479 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-37 | 409 | 492 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-89 | 62 | 376 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 45 | 492 | 8 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001031936.1 | 0 | 60 | 492 | 28 | 455 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002271991.1 | 0 | 45 | 489 | 8 | 476 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 34 | 492 | 5 | 463 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 37 | 486 | 9 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 62 | 376 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 62 | 376 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 62 | 376 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 62 | 376 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 62 | 376 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY278014 | 357 | 60 | 416 | 0 |
EG484762 | 295 | 60 | 354 | 0 |
EG486112 | 299 | 88 | 386 | 0 |
FC903920 | 277 | 60 | 336 | 0 |
EG484766 | 307 | 132 | 437 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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