Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.205100.1 |
Family | GH3 |
Protein Properties | Length: 773 Molecular Weight: 83531.5 Isoelectric Point: 8.7109 |
Chromosome | Chromosome/Scaffold: 01416 Start: 214050 End: 218560 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 322 | 0 |
AAVPRLGIKGYEWWSEALHGVSNVGPGTEFGGDFPGATSFPQVITTVASFNVSLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPG EDPVVAGEYAARYIKGLQGNDGDRLKVAACCKHFTAYDLDNWNGTDRFHFNAKVTRQDMVDTFEVPFRKCVKEGKVASVMCSYNQVNGVPTCADPNLLKG TIRNQWGLNGYIVSDCDSVGVFYDNQHYTSTAEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 773 Download |
MATAAHRIIP ILIILSAIFR HGGGAREPFA CDPKDAALSR YPFCRVALPI PERVKDLIGR 60 LTLQEKVRLL VNNAAAVPRL GIKGYEWWSE ALHGVSNVGP GTEFGGDFPG ATSFPQVITT 120 VASFNVSLWE AIGRVVSDEA RAMYNGGAAG LTYWSPNVNI FRDPRWGRGQ ETPGEDPVVA 180 GEYAARYIKG LQGNDGDRLK VAACCKHFTA YDLDNWNGTD RFHFNAKVTR QDMVDTFEVP 240 FRKCVKEGKV ASVMCSYNQV NGVPTCADPN LLKGTIRNQW GLNGYIVSDC DSVGVFYDNQ 300 HYTSTAEEAA ADAIKAGLDL DCGPFLAVHT EDAVKKGLLT QTHINNALAN TITVQMRLGM 360 FDGAPSSHAY GKLGPKNVCS PSHQQLALDA ARQGIVLLKN RLPGLPLSAD HHRTVAVIGP 420 NSDVNVTMIG NYAGVACGYV TPLEGIKRYT TVVHRKGCDN VACATDYSFT DALAAASTAD 480 ATVLVMGLDQ SVEAETKDRD GLLLPGRQQE LVLKVAAASR GPTVVILMSG GPIDVSFADN 540 DPRISAILWV GYPGQAGGAA IADVLFGTTN PGGKLPMTWY PQSYLSNLPM TNMAMRSTSS 600 YPGRTYRFYA GPVVYEFGHG LSYTNFIHTI VKAPTIVSIS LSGHRQTHSA STLSSKAIRV 660 THAKCQKLSL VIHVDVENKG DRDGFHTMLV FSTPPANGAT WVPRKQLVAF EKLHLASREK 720 RRLQVHVHVC KYLSVVDKLG VRRIPLGDHY IHIGNVKHTV SLQAATLGII KT* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-51 | 72 | 447 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-52 | 395 | 624 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-60 | 55 | 354 | 307 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 8.0e-66 | 112 | 724 | 666 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 25 | 764 | 759 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 8 | 772 | 7 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 8 | 772 | 12 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 3 | 772 | 6 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 25 | 764 | 24 | 761 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 20 | 772 | 19 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 112 | 727 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u48_A | 0 | 112 | 727 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u4a_B | 0 | 112 | 727 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u4a_A | 0 | 112 | 727 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2x41_A | 4.99983e-42 | 52 | 715 | 2 | 661 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |