Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.229010.1 |
Family | GH35 |
Protein Properties | Length: 842 Molecular Weight: 93632.6 Isoelectric Point: 7.7313 |
Chromosome | Chromosome/Scaffold: 01938 Start: 267 End: 6508 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 336 | 0 |
IINGHRRILISGSIHYPRSTSEMWPDLIQKAKEGGLDVIETYVFWNGHEPEPGKYYFEGNYDLVRFVKLVHQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNAPFKFQMERFTRKIVNMMKAERLYESQGGPIILSQIENEYGPMEYELGAPGKAYSKWAAQMALGLGTGVPWVMCKQDDAPDPIINTCNGF YCDYFSPNKAYKPKMWTEAWTGWFTQFGGAVPHRPAEDMAFAVARFIQKGGALINYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLLRQPKWGHLKD L |
Full Sequence |
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Protein Sequence Length: 842 Download |
MELENLKMWN VIMGFLCFFG VLSVQASVSY DSKAIIINGH RRILISGSIH YPRSTSEMWP 60 DLIQKAKEGG LDVIETYVFW NGHEPEPGKY YFEGNYDLVR FVKLVHQAGL YVHLRIGPYV 120 CAEWNFGGFP VWLKYIPGIS FRTDNAPFKF QMERFTRKIV NMMKAERLYE SQGGPIILSQ 180 IENEYGPMEY ELGAPGKAYS KWAAQMALGL GTGVPWVMCK QDDAPDPIIN TCNGFYCDYF 240 SPNKAYKPKM WTEAWTGWFT QFGGAVPHRP AEDMAFAVAR FIQKGGALIN YYMYHGGTNF 300 GRTAGGPFIA TSYDYDAPID EYGLLRQPKW GHLKDLNRAI KLCEPALVSG DPIVTRLGNY 360 QEAHVFKSKS GACAAFLSNY NPRSYATVAF GNMHYNIPPW SISILPDCKN TVFNTARVGA 420 QTAIMKMSPV PMHESFSWQA YNEEPASYNE KAFTTVGLLE QINTTRDATD YLWYTTDVHI 480 DANEGFLRSG KYPVLTVLSA GHAMHVFVNG QLAGTAYGSL DFPKLTFSRG VNLRAGNNKI 540 ALLSIAVGLP NVGPHFEMWN AGILGPVNLN GLDEGRRDLT WQKWTYKIGL DGEAMSLHSL 600 SGSSSVEWIQ GSLVAQKQPL TWFKTTFNAP AGNSPLALDM GSMGKGQIWL NGQSLGRYWP 660 AYKSTGSCGS CDYTGTYNEK KCSSNCGEAS QRWYHVPRSW LNPTGNLLVV FEEWGGDPNG 720 IHLVRRDVDS VCVNINEWQP TLMNWQMQSS GKVNKPLRPK AHLSCGPGQK ISSVKFASFG 780 TPEGECGSFR EGSCHAHHSY DAFQRTCVGQ NFCTVTVAPE MFGGDPCPNV MKKLSVEVIC 840 S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-7 | 50 | 186 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-21 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-25 | 28 | 330 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-161 | 34 | 340 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 21 | 841 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 23 | 841 | 28 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 21 | 841 | 21 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 17 | 841 | 22 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 23 | 841 | 21 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 3 | 841 | 6 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4.2039e-45 | 25 | 336 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-40 | 28 | 410 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-40 | 28 | 410 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 723 | 11 | 730 | 0 |
HO780602 | 662 | 78 | 726 | 0 |
HO795552 | 526 | 118 | 642 | 0 |
HO795552 | 65 | 15 | 79 | 4e-38 |
HO795552 | 51 | 79 | 129 | 4e-38 |
Sequence Alignments (This image is cropped. Click for full image.) |
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