Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.237330.1 |
Family | GH5 |
Protein Properties | Length: 411 Molecular Weight: 45717.5 Isoelectric Point: 5.2852 |
Chromosome | Chromosome/Scaffold: 02023 Start: 275395 End: 278559 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 25 | 333 | 3.8e-33 |
NGSPFLFNGFNSYWMMSVATDPNQRNKVTQVFRDAAAAGLTVCRTWAFNDGGFHALQISPGVYDESVFQGLDFVIFEARKYGIRMILSLVNNFKDYGGRA AYVRWAEAAGVQVHDEDDFYTNQLIKTYYKNHVQKVLSRKNTMNGLIYMEDATIMGWELMNEPRCQVDSSGNTVNRWVEEMGSYVKSIDKQHLVGIGMEG FYGDSSPNKIKANPGSFKFGTDFITNNLNKAIDFATIHAYPDAWLPGKSEGTKMAFLEEWIALHWTDSKTILKKPLIFEEFGKSIRDQNQTSSSVRDRDA FLSKVFSII |
Full Sequence |
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Protein Sequence Length: 411 Download |
TLSASSSSPA PAAFVGVQDG HFQLNGSPFL FNGFNSYWMM SVATDPNQRN KVTQVFRDAA 60 AAGLTVCRTW AFNDGGFHAL QISPGVYDES VFQGLDFVIF EARKYGIRMI LSLVNNFKDY 120 GGRAAYVRWA EAAGVQVHDE DDFYTNQLIK TYYKNHVQKV LSRKNTMNGL IYMEDATIMG 180 WELMNEPRCQ VDSSGNTVNR WVEEMGSYVK SIDKQHLVGI GMEGFYGDSS PNKIKANPGS 240 FKFGTDFITN NLNKAIDFAT IHAYPDAWLP GKSEGTKMAF LEEWIALHWT DSKTILKKPL 300 IFEEFGKSIR DQNQTSSSVR DRDAFLSKVF SIIYNLARNG ATMAGGLVWQ VMAEGMESYY 360 DGYEIVLSQT PSTTAIITHQ REGTRGMEGM EGMEGIEVTG RDGESLKEGI * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.002 | 68 | 188 | 126 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-6 | 25 | 319 | 301 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-23 | 22 | 308 | 289 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC08208.1 | 0 | 8 | 393 | 32 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
Swiss-Prot | Q6YM50 | 0 | 14 | 387 | 39 | 408 | MAN5_SOLLC RecName: Full=Mannan endo-1,4-beta-mannosidase 5; AltName: Full=Beta-mannanase 5; AltName: Full=Endo-beta-1,4-mannanase 5; AltName: Full=LeMAN5; Flags: Precursor |
RefSeq | XP_002270023.1 | 0 | 12 | 380 | 30 | 393 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 12 | 393 | 29 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 14 | 380 | 32 | 393 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 14 | 380 | 6 | 365 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 17 | 381 | 15 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 17 | 381 | 15 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 17 | 381 | 15 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 17 | 381 | 15 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG549060 | 218 | 14 | 231 | 0 |
JG548201 | 212 | 14 | 225 | 0 |
JK974111 | 367 | 14 | 380 | 0 |
JG546004 | 204 | 14 | 217 | 0 |
HO794665 | 368 | 14 | 380 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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