y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.239920.1 |
Family | CBM43 |
Protein Properties | Length: 212 Molecular Weight: 22939 Isoelectric Point: 4.0775 |
Chromosome | Chromosome/Scaffold: 02046 Start: 810586 End: 812635 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 135 | 211 | 2.9e-29 |
WCVAKPSVPDPIIQEAMNYACGTVADCDSILPSGPCFMPNTLIAHASYAFNSYWQRTKVGGGTCEFGGTAMLVTVDP |
Full Sequence |
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Protein Sequence Length: 212 Download |
MFIEDRENDC IIAMPYVSSP FTLPPFDSLP DNAPPYCSYP PITPQPPSSP FTYISSPPPP 60 FYYLPPPTPT YGFPPSPPSL TPPYYYEPSP PSYVPSRPPS PTVFVPSPPV FQPPVIYPPP 120 SVPPPPHSAP NIALWCVAKP SVPDPIIQEA MNYACGTVAD CDSILPSGPC FMPNTLIAHA 180 SYAFNSYWQR TKVGGGTCEF GGTAMLVTVD PX 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-23 | 134 | 205 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-33 | 134 | 211 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 16 | 211 | 70 | 252 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 16 | 211 | 61 | 243 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 0 | 16 | 211 | 70 | 252 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 9 | 211 | 2 | 291 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 15 | 211 | 8 | 253 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000003 | 135 | 211 | 13 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK297659 | 79 | 133 | 211 | 2e-40 |
CO982195 | 79 | 133 | 211 | 1e-39 |
GR029881 | 79 | 133 | 211 | 1e-38 |
GR029880 | 79 | 133 | 211 | 1e-38 |
FS982989 | 79 | 133 | 211 | 1e-38 |
Sequence Alignments (This image is cropped. Click for full image.) |
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