| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.242270.1 |
| Family | AA7 |
| Protein Properties | Length: 567 Molecular Weight: 62508.5 Isoelectric Point: 6.2041 |
| Chromosome | Chromosome/Scaffold: 02047 Start: 2019167 End: 2030623 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 144 | 338 | 1.3e-25 |
| IPDVVVFPRSEEEVSEIIKLCDQYKVPIVPYGGATSIEGHTLAPNGGLCIDMSLMNKVKALHVEDMDVTVEPGIGWMELNEYLEPYGLFFPLDPGPGATI GGMCATRCSGSLAVRYGTMRDNVINLKAVLANGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEITLRLQKLPEYSVVAMCNFPSIKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 567 Download |
| MAFSSWFSRF RSSSNSLYHS LFRGASFQNL GAQTSVISRT SSSQNGGRRF LLWSTSVVPF 60 ALAGSLAFQF QLQSHSSFCD DSDIHDRFGG KDSTEYVVKG SHNDISQPFI DKLGRICKDN 120 MTLDYDERYF HGKPQNSFHV AVNIPDVVVF PRSEEEVSEI IKLCDQYKVP IVPYGGATSI 180 EGHTLAPNGG LCIDMSLMNK VKALHVEDMD VTVEPGIGWM ELNEYLEPYG LFFPLDPGPG 240 ATIGGMCATR CSGSLAVRYG TMRDNVINLK AVLANGDVVK TASRARKSAA GYDLTRLMIG 300 SEGTLGVITE ITLRLQKLPE YSVVAMCNFP SIKDAADVAI ATMLSGIQVS RMELLDEVQV 360 RAINNANGKN LPESPTLMFE FIGTEAYSRE QTLIVQQIVS EHNGSDFVFA EDPEAKKELW 420 KIRKEALWAC FALVPHFEAM ITDVCVPLSH LAELISSSKR ELDASSLVCT VIAHAGDGNF 480 HTVILFDPKE EKQRKEAERL NHMMVYKALS MEGTCTGEHG VGTGKMKYLE KELGLEALRT 540 MKRIKTALDP NNIMNPGKLI PPHICF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 2.0e-51 | 144 | 565 | 427 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 8.0e-71 | 318 | 559 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 2.0e-100 | 148 | 558 | 415 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 1.0e-126 | 118 | 562 | 458 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 25 | 566 | 547 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 81 | 566 | 70 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 1 | 566 | 1 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 1 | 566 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 88 | 566 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 566 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 6.99949e-42 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 6.99949e-42 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 6.99949e-42 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 6.99949e-42 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 6.99949e-42 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 323 | 159 | 480 | 0 |
| AM736915 | 277 | 291 | 567 | 0 |
| DY305587 | 371 | 201 | 566 | 0 |
| EX261606 | 322 | 216 | 533 | 0 |
| EX261606 | 50 | 514 | 563 | 0.14 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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