Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.251330.1 |
Family | GT47 |
Protein Properties | Length: 399 Molecular Weight: 45718.2 Isoelectric Point: 4.9869 |
Chromosome | Chromosome/Scaffold: 02229 Start: 440734 End: 441931 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 3 | 345 | 0 |
CNSGRVFVYDLPPFFNKDLLQNCESLDPWTSRCDDVSNGGFGRQATELNGVVPDGLTPAWFWSEQYMLEPIMHNRILNYKCRTLDPESATAFYIPFYAGL SIGRYLWLNYTTSDRDRDSEKLIEWVQNEPYWNRSNGGDHFITLGRLTWDFKRWGNNQWGSSFAFMPGMKNVARLVVEREPSDPLDIGVPFPTGFHPRSD ADVLNWQSFVRERNRTNLFCFAGGTRHEIENDFRAFLLSYCANDSGGSCRAVECNGNRCASGDSVVMETFLDSDFCLQPKGDSYSRKSVFDCMLAGSIPV IFWERTAYGQYEWFLPGEPGSYSVFIDNKEVRNGSASIKGVLE |
Full Sequence |
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Protein Sequence Length: 399 Download |
DPCNSGRVFV YDLPPFFNKD LLQNCESLDP WTSRCDDVSN GGFGRQATEL NGVVPDGLTP 60 AWFWSEQYML EPIMHNRILN YKCRTLDPES ATAFYIPFYA GLSIGRYLWL NYTTSDRDRD 120 SEKLIEWVQN EPYWNRSNGG DHFITLGRLT WDFKRWGNNQ WGSSFAFMPG MKNVARLVVE 180 REPSDPLDIG VPFPTGFHPR SDADVLNWQS FVRERNRTNL FCFAGGTRHE IENDFRAFLL 240 SYCANDSGGS CRAVECNGNR CASGDSVVME TFLDSDFCLQ PKGDSYSRKS VFDCMLAGSI 300 PVIFWERTAY GQYEWFLPGE PGSYSVFIDN KEVRNGSASI KGVLEKFSRE RVRMMREKVI 360 ETIPKIVYAS APEGLESIED AFDIAIHGIF ERFNRRHNS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-53 | 2 | 347 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA97186.1 | 0 | 3 | 393 | 118 | 507 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_201028.1 | 0 | 3 | 396 | 118 | 510 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 3 | 396 | 92 | 483 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 3 | 396 | 112 | 505 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 396 | 97 | 490 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 370 | 16 | 385 | 0 |
DY267021 | 344 | 42 | 385 | 0 |
EL434952 | 313 | 15 | 326 | 0 |
DY275065 | 345 | 7 | 350 | 0 |
DY275065 | 70 | 301 | 368 | 0.086 |
Sequence Alignments (This image is cropped. Click for full image.) |
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