Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.251950.1 |
Family | CBM43 |
Protein Properties | Length: 468 Molecular Weight: 52076.3 Isoelectric Point: 4.6381 |
Chromosome | Chromosome/Scaffold: 02229 Start: 1000850 End: 1003462 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 378 | 460 | 9e-27 |
WCVAARGVDLMELGATVDDVCGRGDGTCEALSPGRECYEPVSVYWHASYAFSSYWSKFRSQGASCYFNGLAEQTTTDPSNGSC | |||
GH17 | 28 | 351 | 0 |
IGINYGQLGNNLPAPNLAIEMMNSMRVGRVKLYDANHEILSNLSKTKFQVSIMIPNNEISGIANNQTRADQWILNNLLPFYPQTMIRFILVGNEVLSLDS DIDRQVWNDLVPAMRRIWSSLKANNLQIIRVGTPVAMDVLETTFPPSRGTFRSDIQRTVVAPMLDFLNETRSFFFANVYPYFAWAADPMNINLDFALFNG NFEQIDGGSGLVYTNLLDEMLDSLIFAMAKLGYPDIRLVISETGWPTAGDMEQPGANLLNAATYNRNLVKRITAKPTVGTPARPKVVIPTFIFSLFDENQ KPGSGTERHWGLLSSDGSPNYQID |
Full Sequence |
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Protein Sequence Length: 468 Download |
METFVLNCYL FLCFSLILIS DAEISSKIGI NYGQLGNNLP APNLAIEMMN SMRVGRVKLY 60 DANHEILSNL SKTKFQVSIM IPNNEISGIA NNQTRADQWI LNNLLPFYPQ TMIRFILVGN 120 EVLSLDSDID RQVWNDLVPA MRRIWSSLKA NNLQIIRVGT PVAMDVLETT FPPSRGTFRS 180 DIQRTVVAPM LDFLNETRSF FFANVYPYFA WAADPMNINL DFALFNGNFE QIDGGSGLVY 240 TNLLDEMLDS LIFAMAKLGY PDIRLVISET GWPTAGDMEQ PGANLLNAAT YNRNLVKRIT 300 AKPTVGTPAR PKVVIPTFIF SLFDENQKPG SGTERHWGLL SSDGSPNYQI DLTGKESSVE 360 YDPLPVVENN MPFRGRLWCV AARGVDLMEL GATVDDVCGR GDGTCEALSP GRECYEPVSV 420 YWHASYAFSS YWSKFRSQGA SCYFNGLAEQ TTTDPSNGSC RFPSVTF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 265 | 343 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-16 | 377 | 448 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-33 | 377 | 462 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-111 | 28 | 351 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64490.1 | 0 | 24 | 467 | 33 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
GenBank | ABK28569.1 | 0 | 24 | 467 | 33 | 476 | unknown [Arabidopsis thaliana] |
EMBL | CBI39470.1 | 0 | 10 | 467 | 11 | 467 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189019.1 | 0 | 24 | 467 | 33 | 476 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002298669.1 | 0 | 19 | 466 | 14 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 28 | 352 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 28 | 352 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |