Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.252510.1 |
Family | CE8 |
Protein Properties | Length: 351 Molecular Weight: 38826.9 Isoelectric Point: 9.3856 |
Chromosome | Chromosome/Scaffold: 02229 Start: 1432431 End: 1434912 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 57 | 342 | 0 |
KVDINGNGEFKSIQAAVDSVPEGNSQWMIIHVRKGIYREKVHIPSSKPYIFLRGNGKGRTSIVWSQSSSDNVESATFKVEAHNFIAFGVSFKNEAPTGVA YTSQNQSVAAFVAADKIAFYHCGFYSTHNTLFDYKGRHYYDKCYIQGSIDFIFGRGKSVFHNCEMFVIDDKRLTIRGSITAQNRKSANENSGFVFIKGKV YGVGGTYLGRAKGAFSRVIFAKTYFSISVVPAGWTNWSHVGSTENLYHGEYDCYGPGSESGNRAPWAKQLTKEEATPFMEVTFIDG |
Full Sequence |
---|
Protein Sequence Length: 351 Download |
MADSSSNSLF IKPIYIAFAI AFTFLISSPI GSYAFTAQNV IDSPLLTKKI GTNRTIKVDI 60 NGNGEFKSIQ AAVDSVPEGN SQWMIIHVRK GIYREKVHIP SSKPYIFLRG NGKGRTSIVW 120 SQSSSDNVES ATFKVEAHNF IAFGVSFKNE APTGVAYTSQ NQSVAAFVAA DKIAFYHCGF 180 YSTHNTLFDY KGRHYYDKCY IQGSIDFIFG RGKSVFHNCE MFVIDDKRLT IRGSITAQNR 240 KSANENSGFV FIKGKVYGVG GTYLGRAKGA FSRVIFAKTY FSISVVPAGW TNWSHVGSTE 300 NLYHGEYDCY GPGSESGNRA PWAKQLTKEE ATPFMEVTFI DGTDWLPAWL * 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 3.0e-90 | 56 | 346 | 291 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 7.0e-93 | 54 | 346 | 296 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 7.0e-93 | 16 | 346 | 356 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 9.0e-96 | 54 | 347 | 304 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 12 | 350 | 340 | + Probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 32 | 350 | 28 | 346 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 20 | 350 | 9 | 340 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 7 | 350 | 2 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 9 | 349 | 1 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 32 | 350 | 33 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.9937e-43 | 50 | 348 | 5 | 310 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 61 | 346 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000005 | 65 | 256 | 43 | 252 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000000002 | 66 | 347 | 18 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000000002 | 66 | 347 | 18 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |