Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.254850.1 |
Family | GH47 |
Protein Properties | Length: 616 Molecular Weight: 69005.8 Isoelectric Point: 4.7011 |
Chromosome | Chromosome/Scaffold: 02229 Start: 3049773 End: 3060216 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 48 | 473 | 0 |
MFYHAFNGYMKHAFPLDELRPLSCEGEDSLGGYALTLIDSLDTLALLGDREQFAASVEWIGKNLRFDINKTVSLFETNIRVLGGLLSAHLIASDHTTGMK IASYENQLLDLAEDLGRRLLPAFDTPTGIPFGSVNLLYGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFERVTKNAVRGLWACRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLFIFQEAYGAVMHYLFNDPWYVEVNMDSGALVWPLFNSLQAFWPGLQVLAGDIDPAIRTHTAFLSV WKRYGFTPEGFNLATLSVQHGQKSYPLRPELIESTYWLYKATRNPRYLDAGRDMVTSLQYGARCPCGYCHISDVEFHKQEDHMESFFLAETVKYLWLLFD LAAGPDNLVENGPYKYVFSTEGHLLP |
Full Sequence |
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Protein Sequence Length: 616 Download |
MEAPSAQLPF FFLFLLLSIS FPIFIQNSLA DGVTPHEAKQ LRDEVREMFY HAFNGYMKHA 60 FPLDELRPLS CEGEDSLGGY ALTLIDSLDT LALLGDREQF AASVEWIGKN LRFDINKTVS 120 LFETNIRVLG GLLSAHLIAS DHTTGMKIAS YENQLLDLAE DLGRRLLPAF DTPTGIPFGS 180 VNLLYGVDEH ESKITSTAGG GTLTLEFGVL SRLTNDPIFE RVTKNAVRGL WACRSKLNLV 240 GAHINVFTGE WTQKDAGIGT SIDSFYEYLL KAYLLFGDEE YLFIFQEAYG AVMHYLFNDP 300 WYVEVNMDSG ALVWPLFNSL QAFWPGLQVL AGDIDPAIRT HTAFLSVWKR YGFTPEGFNL 360 ATLSVQHGQK SYPLRPELIE STYWLYKATR NPRYLDAGRD MVTSLQYGAR CPCGYCHISD 420 VEFHKQEDHM ESFFLAETVK YLWLLFDLAA GPDNLVENGP YKYVFSTEGH LLPATPQISL 480 VREHCSYLGA FCKSEVEPES GNINNATDVE EAKRSFSEGT TSAEIPSSSD FSELTSTTGL 540 IRGVCPGLTH GQKFGITYIR SKMTDDSVNK RETVEKHLTV VETDQNSRHL TSHEINHYNS 600 QELEEEDVLN DPHAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 4.0e-81 | 42 | 477 | 478 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-172 | 48 | 473 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26354.1 | 0 | 31 | 576 | 28 | 605 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199184.1 | 0 | 6 | 601 | 3 | 589 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280131.1 | 0 | 31 | 583 | 28 | 580 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311656.1 | 0 | 30 | 587 | 1 | 563 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517026.1 | 0 | 9 | 587 | 7 | 592 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 22 | 473 | 4 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 29 | 446 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 29 | 446 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 29 | 446 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 29 | 446 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |