Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.256570.1 |
Family | GH35 |
Protein Properties | Length: 891 Molecular Weight: 99875.3 Isoelectric Point: 7.1651 |
Chromosome | Chromosome/Scaffold: 02229 Start: 4154527 End: 4166780 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 343 | 0 |
LIIDGKRRMLISAGVHYPRASPEMWPDIIEKSKEGGADVIQSYVFWNGHEPTKGQYNFDGRYDLVKFIRLVGSSGLYLHLRIGPYVCAEWNFGGFPLWLR DVPGIEFRTDNAPFKEEMQRFVKKIVDLLRDEKLFCWQGGPVIMLQVENEYGNIESSYGKRGQEYIKWVGNMALGLGAEVPWVMCQQKDAPSTIINSCNG YYCDGFKANSPSKPIFWTENWNGWFTSWGERSPHRPVEDLAFSVARFFQREGSFQNYYMYFGGTNFGRTAGGPFYITSYDYDSPIDEYGLIREPKWGHLK DLHT |
Full Sequence |
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Protein Sequence Length: 891 Download |
MAVRGVLIVQ LMSLTLTIHL LVVSGEFFKP FNVSYDHRAL IIDGKRRMLI SAGVHYPRAS 60 PEMWPDIIEK SKEGGADVIQ SYVFWNGHEP TKGQYNFDGR YDLVKFIRLV GSSGLYLHLR 120 IGPYVCAEWN FGGFPLWLRD VPGIEFRTDN APFKEEMQRF VKKIVDLLRD EKLFCWQGGP 180 VIMLQVENEY GNIESSYGKR GQEYIKWVGN MALGLGAEVP WVMCQQKDAP STIINSCNGY 240 YCDGFKANSP SKPIFWTENW NGWFTSWGER SPHRPVEDLA FSVARFFQRE GSFQNYYMYF 300 GGTNFGRTAG GPFYITSYDY DSPIDEYGLI REPKWGHLKD LHTALKLCEP ALVSADSPQY 360 IKLGPKQEAH VYHMKSQTDD LTLSKLGTLR NCSAFLANID ERKAVAVKFN GQTYNLPPWS 420 VSILPDCQNV VFNTAKVAAQ TSIKILELYA PLSANVSLKL HATDQNELSI IANSWMTVKE 480 PIGIWSDQNF TVKGILEHLN VTKDRSDYLW YMTRIHVSND DIRFWKERNI TPTITIDSVR 540 DVFRVFVNGK LTGSAIGQWV KFVQPVQFLE GYNDLLLLSQ AMGLQNSGAF IEKDGAGIRG 600 RIKLTGFKNG DIDLSKSLWT YQVGLKGEFL NFYSLEENEK ADWTELSVDA IPSTFTWYKA 660 YFSSPDGTDP VAINLGSMGK GQAWVNGHHI GRYWSVVSPK DGCPRKCDYR GAYNSGKCAT 720 NCGRPTQSWY HIPRSWLKES SNLLVLFEET GGNPLEIVVK LYSTGVICGQ VSESHYPSLR 780 KLSNDYISDG ETLSNRANPE MFLHCDDGHV ISSVEFASYG TPQGSCNKFS RGPCHATNSL 840 SVVSQACLGK NSCTVEISNS AFGGDPCHSI VKTLAVEARC SSTSSIHSSV * 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 8.0e-5 | 55 | 203 | 165 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 9.0e-24 | 33 | 335 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-25 | 803 | 880 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-160 | 39 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 32 | 880 | 854 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 9 | 886 | 11 | 890 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 9 | 886 | 11 | 889 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002263385.1 | 0 | 6 | 889 | 6 | 880 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002328900.1 | 0 | 6 | 886 | 9 | 886 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 23 | 886 | 30 | 892 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 39 | 341 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.000002 | 533 | 756 | 399 | 580 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 6e-40 | 31 | 360 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 6e-40 | 31 | 360 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |