CAZyme Information

Basic Information
SpeciesCucumis sativus
Cazyme IDCucsa.259130.1
FamilyGH18
Protein PropertiesLength: 430 Molecular Weight: 48535.4 Isoelectric Point: 7.49
ChromosomeChromosome/Scaffold: 02229 Start: 5763825 End: 5768287
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181784202e-31
  TDLLRKKKLKDKAIDLIVTECKEMGYDGIVLESWSRWVAYGILRDPDMRNLALQFIKQLGNALHSELESTRSKQPLQLVYVIGPPHSEVLEEHEFGPKDM
  ESLTGAVDGFSLMTYDYSGAHNPGPNAPVNWIRSTLRLLLGTKDISLVQHKAIKIFLGINFYGYDFSMSGGGGAITGRDYLSLLEKYKPVVQWEGISSEH
  FFLYTDYNRNKHAVFFPSLKSIFIRLEVAQSFGTGISIWEIGQ
Full Sequence
Protein Sequence     Length: 430     Download
MAKKRDRQAV SNRRKNQVVS SDDHQNIVAD SSSDRRLITI FVIFFIISPA ISALVYLKYT    60
SSGKFSGASV FERGLVKTDI SYQEILAEHS NVAGNISRNY DYPVLAYITP WNSRGYDMAK    120
KFNSKFTHLS PVWYDLKSHG SHLALEGRHN VDEEWISELR LTGDALILPR VAVEAPPTDL    180
LRKKKLKDKA IDLIVTECKE MGYDGIVLES WSRWVAYGIL RDPDMRNLAL QFIKQLGNAL    240
HSELESTRSK QPLQLVYVIG PPHSEVLEEH EFGPKDMESL TGAVDGFSLM TYDYSGAHNP    300
GPNAPVNWIR STLRLLLGTK DISLVQHKAI KIFLGINFYG YDFSMSGGGG AITGRDYLSL    360
LEKYKPVVQW EGISSEHFFL YTDYNRNKHA VFFPSLKSIF IRLEVAQSFG TGISIWEIGQ    420
GLDYFFDLL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_181.0e-9194420245+
smart00636Glyco_186.0e-20104420352+
COG3858COG38582.0e-21194429244+
cd02874GH18_CFLE_spore_hydrolase5.0e-25104429352+
cd02876GH18_SI-CLP9.0e-140100429335+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.107042974516hypothetical protein [Vitis vinifera]
EMBLCBI40499.107042974435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.106842967430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.105842927399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.107242973432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A06442939393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B06442939393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.00000001276418167308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.00000001276418167308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
3756
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG47192627212720
JG46948224912490
JG46881123532370
DY27458236013550
FC88105630413010
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny