CAZyme Information

Basic Information
SpeciesCucumis sativus
Cazyme IDCucsa.259130.2
FamilyGH18
Protein PropertiesLength: 313 Molecular Weight: 35342.5 Isoelectric Point: 6.5911
ChromosomeChromosome/Scaffold: 02229 Start: 5763825 End: 5768287
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18663031.9e-31
  KKKLKDKAIDLIVTECKEMGYDGIVLESWSRWVAYGILRDPDMRNLALQFIKQLGNALHSELESTRSKQPLQLVYVIGPPHSEVLEEHEFGPKDMESLTG
  AVDGFSLMTYDYSGAHNPGPNAPVNWIRSTLRLLLGTKDISLVQHKAIKIFLGINFYGYDFSMSGGGGAITGRDYLSLLEKYKPVVQWEGISSEHFFLYT
  DYNRNKHAVFFPSLKSIFIRLEVAQSFGTGISIWEIGQ
Full Sequence
Protein Sequence     Length: 313     Download
MAKKFNSKFT HLSPVWYDLK SHGSHLALEG RHNVDEEWIS ELRLTGDALI LPRVAVEAPP    60
TDLLRKKKLK DKAIDLIVTE CKEMGYDGIV LESWSRWVAY GILRDPDMRN LALQFIKQLG    120
NALHSELEST RSKQPLQLVY VIGPPHSEVL EEHEFGPKDM ESLTGAVDGF SLMTYDYSGA    180
HNPGPNAPVN WIRSTLRLLL GTKDISLVQH KAIKIFLGIN FYGYDFSMSG GGGAITGRDY    240
LSLLEKYKPV VQWEGISSEH FFLYTDYNRN KHAVFFPSLK SIFIRLEVAQ SFGTGISIWE    300
IGQGLDYFFD LL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_182.0e-1077303244+
smart00636Glyco_188.0e-1877303251+
COG3858COG38588.0e-2377312244+
cd02874GH18_CFLE_spore_hydrolase2.0e-2577312248+
cd02876GH18_SI-CLP2.0e-1251312317+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.101312144516hypothetical protein [Vitis vinifera]
EMBLCBI40499.101312123435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.101312117430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.10131288399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.101312120432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A0131295393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B0131295393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.000000008159301167308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.000000008159301167308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY666243262503090
CX667344229873130
EG658151262182770
EL36022228062780
FD967480238773130
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny