Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.274680.1 |
Family | GH17 |
Protein Properties | Length: 268 Molecular Weight: 29036.8 Isoelectric Point: 3.9631 |
Chromosome | Chromosome/Scaffold: 02541 Start: 25045 End: 26347 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 2 | 263 | 0 |
LWLGTRNEDIEGFATNQEVANAWVNANVVPYYKDVNIAYITVGNEVVPGDAASPFVANAIKNMMQALDNAGVQSDIKVTTVVAMTVLEVSSPPSAGAFSA IAARTMKDIGNVLESSCAPILVNVYPYFAYASNPQQISLSYALFTSTSPVVVDGDLQYFNLLDAMVDSFYAALEKIGVEGVRIGISETGWPTKGNEPFTS VENALTYNKNIVEHVSSGVGTPRMPNLQYDVVLFEMFNEDLKSPGVEQNFGFFDPSMNPVYS |
Full Sequence |
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Protein Sequence Length: 268 Download |
MLWLGTRNED IEGFATNQEV ANAWVNANVV PYYKDVNIAY ITVGNEVVPG DAASPFVANA 60 IKNMMQALDN AGVQSDIKVT TVVAMTVLEV SSPPSAGAFS AIAARTMKDI GNVLESSCAP 120 ILVNVYPYFA YASNPQQISL SYALFTSTSP VVVDGDLQYF NLLDAMVDSF YAALEKIGVE 180 GVRIGISETG WPTKGNEPFT SVENALTYNK NIVEHVSSGV GTPRMPNLQY DVVLFEMFNE 240 DLKSPGVEQN FGFFDPSMNP VYSFWNC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 31 | 254 | 239 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-82 | 4 | 264 | 262 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 4 | 267 | 78 | 338 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 2 | 262 | 78 | 334 | beta-1,3-glucanase [Elaeis guineensis] |
RefSeq | NP_177901.1 | 0 | 4 | 267 | 75 | 335 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 4 | 267 | 58 | 319 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 4 | 265 | 51 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 8 | 262 | 56 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 2 | 256 | 51 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 2 | 256 | 51 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 2 | 256 | 51 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 2 | 256 | 51 | 305 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK802300 | 235 | 31 | 265 | 0 |
JK804435 | 231 | 35 | 265 | 0 |
EY400440 | 223 | 40 | 262 | 0 |
JK804836 | 188 | 78 | 265 | 0 |
JG451228 | 188 | 78 | 265 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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