Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.282900.1 |
Family | GH3 |
Protein Properties | Length: 659 Molecular Weight: 71545.1 Isoelectric Point: 6.832 |
Chromosome | Chromosome/Scaffold: 02653 Start: 191832 End: 197319 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 108 | 341 | 0 |
SSRLGIPMFYGIDAVHGHNNVYNATVFPHNVGLGATRNPDLVRRIGAATALEVRATGISYTFAPCLAVCRDPRWGRCYESYSEDPKIVKEMTEIIIGLQG EPPANYRKGTPYVGGTKKVIACAKHFVGDGGTTHGINENNTVINRHGLLSIHMPAYLDSIIKGVSSVMASYSSWNGVKMHANRELITDFLKGALKFKGFV ISDWEGLDRITSTPHSNYTYSVQASILAGIDMVM |
Full Sequence |
---|
Protein Sequence Length: 659 Download |
MAKIFVQVVV ILCLGWLWWA TMVDAENLKY KDPKQPVGVR VKDLLGRMTL EEKIGQMVQI 60 DRSVANATVM KDYFIGSVLS GGGSVPLPDA RAEDWVNMIN DFQKGSLSSR LGIPMFYGID 120 AVHGHNNVYN ATVFPHNVGL GATRNPDLVR RIGAATALEV RATGISYTFA PCLAVCRDPR 180 WGRCYESYSE DPKIVKEMTE IIIGLQGEPP ANYRKGTPYV GGTKKVIACA KHFVGDGGTT 240 HGINENNTVI NRHGLLSIHM PAYLDSIIKG VSSVMASYSS WNGVKMHANR ELITDFLKGA 300 LKFKGFVISD WEGLDRITST PHSNYTYSVQ ASILAGIDMV MIPYKYAEFI DDVKFLVKNN 360 AIPMDRIDDA VRRILTVKFT MGLFESPMGD YSLVNELGSQ AHRDLARDAV RQSLVLLKNG 420 KNDSKPLLPL SKKSPKILVA GTHADNLGYQ CGGWTIAWQG FSGNNATRGT TILASIKSTV 480 DPSTEVVFRE DPDSDFVKSS DFSYAIVVIG EAPYAETGGD STTLTMLDPG PSTIKNVCDY 540 VECVVIVISG RPIVIEPYIS SIDALVAAWL PGTEGQGVTD ALYGDHGFSG KLPRTWFKSV 600 DQLPMNVGDP HYDPLFPFGF GLTTGSVKDI VARSTSAGIY GTPSLIASIA VAIALCIL* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 7.0e-33 | 110 | 606 | 552 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-43 | 414 | 625 | 232 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-76 | 41 | 630 | 662 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-80 | 48 | 482 | 442 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-87 | 49 | 377 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 4 | 630 | 6 | 626 | unknown [Populus trichocarpa] |
RefSeq | NP_680141.2 | 0 | 1 | 658 | 1 | 657 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 26 | 651 | 24 | 646 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 28 | 628 | 26 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 11 | 649 | 4 | 645 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 30 | 628 | 5 | 603 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1iex_A | 0 | 30 | 628 | 5 | 603 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1iew_A | 0 | 30 | 628 | 5 | 603 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1iev_A | 0 | 30 | 628 | 5 | 603 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1ieq_A | 0 | 30 | 628 | 5 | 603 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |