y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.288710.2 |
Family | CBM43 |
Protein Properties | Length: 424 Molecular Weight: 46069.7 Isoelectric Point: 4.7707 |
Chromosome | Chromosome/Scaffold: 02698 Start: 252296 End: 254755 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 291 | 373 | 5.4e-32 |
WCIASTKASDMDLQNALDWACGSGNVDCTPIQPSQPCFEPDTLVSHASYAFNSYFQQNGATDVACGFGGNGVKVNQDPSYDTC | |||
GH17 | 1 | 269 | 0 |
MIGVPNSDLLPFAQFQSNVDTWLKNSILPYYPATKITYITVGAEVTESPNNVSALVVPAMNNVLTGLKKAGLHKKIKVSSTHSLGVLSRSFPPSVGAFSS NYASFLKPLLEFLAENQSPFMINIYPYYAYRESPNNVSLDYALFESSNEVIDPNTGLLYTNMFDAQIDALYFALMALNFRTIRVMVTETGWPSKGSPKET SATPDNAQTYNTNLIRHVINNTGTPARPGEELDVYIFSLFNENRKPGLDSERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 424 Download |
MIGVPNSDLL PFAQFQSNVD TWLKNSILPY YPATKITYIT VGAEVTESPN NVSALVVPAM 60 NNVLTGLKKA GLHKKIKVSS THSLGVLSRS FPPSVGAFSS NYASFLKPLL EFLAENQSPF 120 MINIYPYYAY RESPNNVSLD YALFESSNEV IDPNTGLLYT NMFDAQIDAL YFALMALNFR 180 TIRVMVTETG WPSKGSPKET SATPDNAQTY NTNLIRHVIN NTGTPARPGE ELDVYIFSLF 240 NENRKPGLDS ERNWGLFYPD QTSVYNLDFT GKSVVDMTAQ ANSTASNGTA WCIASTKASD 300 MDLQNALDWA CGSGNVDCTP IQPSQPCFEP DTLVSHASYA FNSYFQQNGA TDVACGFGGN 360 GVKVNQDPSY DTCLYATTGK NKTISSSNTT AISSTSSSSS SRIEFSAGLL VMLIFISCFL 420 KIS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-7 | 180 | 260 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-20 | 291 | 362 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 291 | 375 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-93 | 1 | 269 | 269 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 391 | 77 | 470 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 391 | 77 | 470 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 420 | 76 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 1 | 379 | 77 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 393 | 76 | 468 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 269 | 51 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 1 | 269 | 53 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 1 | 269 | 53 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 1 | 269 | 53 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 1 | 269 | 53 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR946401 | 291 | 54 | 344 | 0 |
DT738192 | 284 | 45 | 328 | 0 |
EE078272 | 265 | 65 | 329 | 0 |
GR848751 | 253 | 100 | 352 | 0 |
GO370513 | 295 | 34 | 328 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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